Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7788 |
Symbol | |
ID | 5150450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 8172371 |
End bp | 8172916 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640562414 |
Product | putative heat shock protein (HSP-70 cofactor), grpE |
Protein accession | YP_001243521 |
Protein GI | 148258936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0272135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.30698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGATGT CATCACCGCA TAGCATAGAA GACGAGGCGG TTGCCACCGA AGCCACCGAT GTCGCCACGC TTTTGTCCGA AAATGCTTCG TTGAAGGATC GTCTTCTGCG CGCGCTCGCC GACGCCGAAA ATGCGAGGCG GCAAGCTGAT CGGAAGGCTG AGGATACGCG CAAATTTGCC GTCGCAGAAT TCGCACGCGA GTTATTGCCG GTTATCGATA ATCTTCAGCG TGTGATCGAA GCAAGAAAAA CGGTGCCATC TACACAGCAT GATGCGTTAT TGGAAGGCGT CGAGACGACC TTGCGACTAT TTCTCCAGAC GCTGGAGCGA TTTGGCGTCA AGAAGATCGC TGCGTCCGGG CAACGATTCG ATCCATCCCT GCATGAGGCG CTAATGGAAG CAGAGGACGC ATCGCATCCA CCGGGAATAA TAACGCGAGT GCTGGAAGAT GGTTATATGA TCCATGACCG CTTGTTGAGG CCAGCACGAG TGGTCGTGTC AAAAAAGCAC CCACCCACCG ACCACGGGTC CATATTGCAA GATTGA
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Protein sequence | MTMSSPHSIE DEAVATEATD VATLLSENAS LKDRLLRALA DAENARRQAD RKAEDTRKFA VAEFARELLP VIDNLQRVIE ARKTVPSTQH DALLEGVETT LRLFLQTLER FGVKKIAASG QRFDPSLHEA LMEAEDASHP PGIITRVLED GYMIHDRLLR PARVVVSKKH PPTDHGSILQ D
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