Gene BBta_7788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7788 
Symbol 
ID5150450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8172371 
End bp8172916 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content54% 
IMG OID640562414 
Productputative heat shock protein (HSP-70 cofactor), grpE 
Protein accessionYP_001243521 
Protein GI148258936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0272135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.30698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATGT CATCACCGCA TAGCATAGAA GACGAGGCGG TTGCCACCGA AGCCACCGAT 
GTCGCCACGC TTTTGTCCGA AAATGCTTCG TTGAAGGATC GTCTTCTGCG CGCGCTCGCC
GACGCCGAAA ATGCGAGGCG GCAAGCTGAT CGGAAGGCTG AGGATACGCG CAAATTTGCC
GTCGCAGAAT TCGCACGCGA GTTATTGCCG GTTATCGATA ATCTTCAGCG TGTGATCGAA
GCAAGAAAAA CGGTGCCATC TACACAGCAT GATGCGTTAT TGGAAGGCGT CGAGACGACC
TTGCGACTAT TTCTCCAGAC GCTGGAGCGA TTTGGCGTCA AGAAGATCGC TGCGTCCGGG
CAACGATTCG ATCCATCCCT GCATGAGGCG CTAATGGAAG CAGAGGACGC ATCGCATCCA
CCGGGAATAA TAACGCGAGT GCTGGAAGAT GGTTATATGA TCCATGACCG CTTGTTGAGG
CCAGCACGAG TGGTCGTGTC AAAAAAGCAC CCACCCACCG ACCACGGGTC CATATTGCAA
GATTGA
 
Protein sequence
MTMSSPHSIE DEAVATEATD VATLLSENAS LKDRLLRALA DAENARRQAD RKAEDTRKFA 
VAEFARELLP VIDNLQRVIE ARKTVPSTQH DALLEGVETT LRLFLQTLER FGVKKIAASG
QRFDPSLHEA LMEAEDASHP PGIITRVLED GYMIHDRLLR PARVVVSKKH PPTDHGSILQ
D