| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7748 |
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| Symbol | |
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| ID | 5149036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 8139663 |
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| End bp | 8140343 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640562388 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001243495 |
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| Protein GI | 148258910 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0520847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0609964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGC GACCTTCGAC GCATTACGGC AAGACACCTG AGCCCGAGAC GCCCTATCAG
CGCGCCGCGC AGGTCTGGGA CGAGCGCATC GGCTCGGCCC GCGTGCAGGC CCGAAACTGG
CGGCTGATGG CTTTCAGTTC GCTCGCGCTG TCGGCCGCCT TCGCCGGTGC GCTGGTTTGG
CAATCGGCGC GGGGCACCGT CGTCCCTTGG GTCGTGCAGG TCGATAATCT CGGCCAAGCC
CAGGCAGTCG CACCTGCGGT CGCCGATTAT CGCCCGACCG ATCCTCAGAT CGCGTTCCAT
CTCGCGCGCT TCATCGAGCA GGTCCGCTCG ATCCCGGCCG ATCCGATCGT GGTTCGGCAG
AATTGGCTGC GCGCCTACGA CTTCACGACC GACCGTGGCG CTGCGGCTCT GAACGACTAC
GCACGCGCCA ACGACCCTTT CACCAAAGTG GGCAAGCAAC AGGTCGCGGT CGACGTTTCG
AGCGTCATTC GAGCGTCGCC CGACAGCTTC CGCGTGGCCT GGACCGAGCG GCGCTATGAG
AACGGCCAGC TCGCATCGAC CGAACGTTGG ACCGCCATCC TCACCATCGT GGTGCAGCCG
CCGCGTGACG CAGAGCGGCT GCGCGCCAAT CCGCTCGGCA TCTACGTCAA TGCGATCAAC
TGGTCGCGGG AGCTGGGGTA A
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| Protein sequence | MFKRPSTHYG KTPEPETPYQ RAAQVWDERI GSARVQARNW RLMAFSSLAL SAAFAGALVW
QSARGTVVPW VVQVDNLGQA QAVAPAVADY RPTDPQIAFH LARFIEQVRS IPADPIVVRQ
NWLRAYDFTT DRGAAALNDY ARANDPFTKV GKQQVAVDVS SVIRASPDSF RVAWTERRYE
NGQLASTERW TAILTIVVQP PRDAERLRAN PLGIYVNAIN WSRELG
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