Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7446 |
Symbol | |
ID | 5151515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7820700 |
End bp | 7821962 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640562102 |
Product | conjugal transfer protein TrbL |
Protein accession | YP_001243211 |
Protein GI | 148258626 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.230538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGCA CGGGAGTCAT CGACAATTTC CTGGGCACCT TCACCCAGTA TATCGATTCC GGCTTCGGCC TCGTTCAAGG TGACGTGCGC TGGCTCGCCA GCGTCCTCAT CGCCATCGAC ATCACGCTGG CGGGGCTCTT CTGGGCGATG GCGCCCGACG AGGACGTGCT CGCGCGCCTG ATCCGCAAGA CGCTCTATAT CGGCCTCTTC GCCTTCATCA TCGGCAACTA CAACAATCTC GCGCAGATCA TCTACAACAG CTTCGCCGGC CTCGGGATCA AGGCCGGTGG CGGCACGATG AGCGCTGCGC AGCTCCTGCA GCCCGGCAAG ATCGCCGAGG TCGGGATCGA TGCCGGCAAG CCGATCCTCA CCGCCATCTC CGGTATGATG GGCTTCACCA GCGTCTTCGC CAATCTGGTG CAGATCGTCA TTCTTCTGGT CGCGTGGCTG ATCGTCGTCA TCAGCTTCTT CGTCATGGCG ATCCAGCTCT TTGTGAGTTT GATCGAGTTC AAGCTGACGA CGTTGGCCGG TTTCGTACTC GTGCCGTTCG GGCTCTTCGG CCGTACGGCC TTCCTCGCCG AACGGGTGCT GGGCAACGTG GTGTCCAGCG GGATCAAGAT TCTCGTGCTC GCCGTCATCA TCGGCATCGG CTCCACGATC TTCAATCAAT TCACCAGCGG CTTCAACAAT CCGCCGACAA TTTCCGACGC GCTGACGCTG ATCCTCGCAG CGCTCTCGCT CCTTGGCCTC ACGATCTTCG GTCCAGGCAT CGCCAATGGC CTGATCGCGG GCGGACCGCA GCTCGGCGCC GGCGCGGCTG TCGCGACAGG ATTGGGAGCG GCCGGGATCG GAGCGGCCGG CATTGCGGCG ACCGCCGGGG GTGTCGCCGC GGCCGGCGGC GCGATCGCCG GGACGGCGCG CGCGGGAGCC GCGGTCGCGG GCGGCGCCAG CGCCGCATAT CGCGCGGGTG GGGCAGCGGG TGTCGCCCAA GCTGCCGGCT CAGTCGCCAT GAGCCCACTG CGCCGCGCCG CCAGCAGCCT TCAAGAAAGC TTCGCCTCTG GCGAGCGTGC CGTCATGAGC GGCGGCGCGC GCTCGTCGTC ATCCGCCGGC GCGTCCGCCG CGTCGGACAG CCCGCCAGCA TGGGCCCAGC GCATGAAGCG CGGCCAGACC ATCAACCGCG GCGTCACCGC CGCCGACCAC GCAATCCGCT CCGGTGATCG GGCAAGCGGC GGGCATCAGG TCGATCTTTC CGAGGGGGAA TAG
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Protein sequence | MGGTGVIDNF LGTFTQYIDS GFGLVQGDVR WLASVLIAID ITLAGLFWAM APDEDVLARL IRKTLYIGLF AFIIGNYNNL AQIIYNSFAG LGIKAGGGTM SAAQLLQPGK IAEVGIDAGK PILTAISGMM GFTSVFANLV QIVILLVAWL IVVISFFVMA IQLFVSLIEF KLTTLAGFVL VPFGLFGRTA FLAERVLGNV VSSGIKILVL AVIIGIGSTI FNQFTSGFNN PPTISDALTL ILAALSLLGL TIFGPGIANG LIAGGPQLGA GAAVATGLGA AGIGAAGIAA TAGGVAAAGG AIAGTARAGA AVAGGASAAY RAGGAAGVAQ AAGSVAMSPL RRAASSLQES FASGERAVMS GGARSSSSAG ASAASDSPPA WAQRMKRGQT INRGVTAADH AIRSGDRASG GHQVDLSEGE
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