Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6832 |
Symbol | |
ID | 5151408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7156806 |
End bp | 7158188 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640561514 |
Product | putative ABC transporter substrate-binding protein |
Protein accession | YP_001242625 |
Protein GI | 148258040 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0145789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATCCA GGGGAATGGG TGCGCTTTCA ATCGCAGTCG CAGCCGCCGG GCTTTTTTGC GCTGCAGCAC CAGCCATCGC TCAGGACACT ATCACCATCT GGTGGAGCAA GGGCTTCTAC AAGTCCGAGG ACGATGCGCT GCTCAACGTC GTCAAGAAAT TCGAGGCCAA GACCGGCATC AAGGTCGAGC TGTCGCAATA CGCGATCCAG GACATGATCC CGAAGACGGT CGCGGCGCTC GACTCGGGCA CCGTGCCCGA CGTGGCCTAT GCCGACACCT ACGACGTTCA GGCCCAGGGC AAATGGGCGT ATGAAGGCAA GCTCGAGGAC CTCACCGACA TCCTGGAGCC GATGAAGTCG GCTTTCGCCC CGAACACGAT CGAGACTGCC TATCTTTATA ACAACGTCAC CAAGAAGAAG GCCTATTACG GCTTTCCGCT GAAGCAGCAG AGCATGCATG TCCAGATCTG GGGCGACATG CTGGAGAAGG CCGGCTTCAA ACAGAGCGAC ATCCCGACCA AGTGGGAGGA TTACTGGACG TTCTGGTGTG ACAAGGTGCA GCCGGGAATC CGCAAGGCCA CCGGCCAGCG CATCTATGGT GTCGGCCAGC CGATGGGCGT GGAATCCACC GACTCGTTCC AGTCGTTCTA CACCTTCATG GACGCCTACA ACGTCAAGCT GGTCGATGAC GACGGTAAGC TGCTGGTCGA CGATCCCAAG GTCCGCGAGG GCCTCGTCAA GGCGCTGAAG GACTATACCG ACACCTACAT CAAGGGCTGC ACGCCGCCCT CCTCCACGAC CTGGAAGGAT CCGGACAACA ACGTCGCGTT CCATAACAAG ACGATCGTGA TGACGCACAA TTTCACGATC TCGATCGCCG CCAAGTGGTT CGAGGACTCC ACCAACCAGG CGCTGACGCC GGAGCAGCGC GCCGCCGGCA AGAAGGCCTA TGAGGAGGAC ATCATCACCG CGTCCTTCCC CAACAAGCCC GACGGCACGC CGATCAAGTA TCGCTCCGAC GTCAAGACCG GTCTGATCTT CAGCAGCGCG AAGAACAAGG CGCAGGCCAA GGAGTTCATC AAGTTCCTGA TGCAGGAAGA GAATCTCGGC CCCTATGTCG AGGGCGCGCT GGGCCGCTGG TTCCCGGTGA CATCAGCCGG CCAGAAGAGC CCGTTCTGGC AAGCCGACCG CCATCGCAAG GCCGTCTACA CCCAGTTCAC CGGCGGCACG ACGCCTTTCG ACTTCACCAA GAACTACAAG TTCACGATTC TCAACAACGA GAACGTCTGG GCGAAGGCGA TGAACCGCGT GGTCAGCGAG AAGGTGCCGG TCGAGAAGGC CGTCGACGAG CTGATCGCGC GTTTGAAGGA GGTCGCAGGC TAG
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Protein sequence | MKSRGMGALS IAVAAAGLFC AAAPAIAQDT ITIWWSKGFY KSEDDALLNV VKKFEAKTGI KVELSQYAIQ DMIPKTVAAL DSGTVPDVAY ADTYDVQAQG KWAYEGKLED LTDILEPMKS AFAPNTIETA YLYNNVTKKK AYYGFPLKQQ SMHVQIWGDM LEKAGFKQSD IPTKWEDYWT FWCDKVQPGI RKATGQRIYG VGQPMGVEST DSFQSFYTFM DAYNVKLVDD DGKLLVDDPK VREGLVKALK DYTDTYIKGC TPPSSTTWKD PDNNVAFHNK TIVMTHNFTI SIAAKWFEDS TNQALTPEQR AAGKKAYEED IITASFPNKP DGTPIKYRSD VKTGLIFSSA KNKAQAKEFI KFLMQEENLG PYVEGALGRW FPVTSAGQKS PFWQADRHRK AVYTQFTGGT TPFDFTKNYK FTILNNENVW AKAMNRVVSE KVPVEKAVDE LIARLKEVAG
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