Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6547 |
Symbol | |
ID | 5153925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6832960 |
End bp | 6833700 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640561246 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001242361 |
Protein GI | 148257776 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.485064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCTT CGGCAACCCG GCCCAGACTG AAAACGCGCT TCAAGCCGAC GCGGCTGAAG CTGTCCTCCG ACCAGTCGAC CCGGCCGCTG GCGCGGCTGT CGCTGCACGA TCAGCTCGTC GCCAAGGTCC GCGAGATGAT CATCGACGGC GAGCTCGCGG CCGGTGCGCC ATTGCCGGAG CGCATGCTGT GCGAGACGTT CGGCGTCTCG CGCACGCCGC TGCGCGAGGC GTTCAAGATC CTCGCCGCCG AAGGTCTGAT CGCGCTGCGG CCCCATCGCA CACCGGTGGT GACGCCGATC GATGCCGGCG AGATCGCCGA GATCTTCGAC GTGATGGTCG CGCTCGACGC TGCCGCCGGC CGCGCGGCGG CCGCGCGCGC CACGGCGGAT GAGATCGCCA GGCTGGATGC GATGCATGAC GAGCTGGTGG CGCTGCACGG CGCCGCCGAG CGCGCCGCCT ATTTCCGGCT CAACCAGCAG ATCCACCTCG AGATCACCAG GCTCGCCGGC AACAGCGTGC TGCTCAACAT CTGGAGCACG CTGCATGCGA GCGTGTTCCG CGCCCGCGCG GTCGCCAATT ACGACGCGCG CCGCTGGGAC GAGTCGCTGC GCGAACACGA GGCTTTCATG GCGCTGCTGC GCGCCCACGA CGCCCAGGGC TTCGCGCTGG CGCTCAGCGC GCACACCCGC AAGACCGGGG ATTCCGTGCT GCAGATGCTG AATCAGGCCA ACAGCGCATA G
|
Protein sequence | MTPSATRPRL KTRFKPTRLK LSSDQSTRPL ARLSLHDQLV AKVREMIIDG ELAAGAPLPE RMLCETFGVS RTPLREAFKI LAAEGLIALR PHRTPVVTPI DAGEIAEIFD VMVALDAAAG RAAAARATAD EIARLDAMHD ELVALHGAAE RAAYFRLNQQ IHLEITRLAG NSVLLNIWST LHASVFRARA VANYDARRWD ESLREHEAFM ALLRAHDAQG FALALSAHTR KTGDSVLQML NQANSA
|
| |