Gene BBta_6547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6547 
Symbol 
ID5153925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6832960 
End bp6833700 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID640561246 
ProductGntR family transcriptional regulator 
Protein accessionYP_001242361 
Protein GI148257776 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.485064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT CGGCAACCCG GCCCAGACTG AAAACGCGCT TCAAGCCGAC GCGGCTGAAG 
CTGTCCTCCG ACCAGTCGAC CCGGCCGCTG GCGCGGCTGT CGCTGCACGA TCAGCTCGTC
GCCAAGGTCC GCGAGATGAT CATCGACGGC GAGCTCGCGG CCGGTGCGCC ATTGCCGGAG
CGCATGCTGT GCGAGACGTT CGGCGTCTCG CGCACGCCGC TGCGCGAGGC GTTCAAGATC
CTCGCCGCCG AAGGTCTGAT CGCGCTGCGG CCCCATCGCA CACCGGTGGT GACGCCGATC
GATGCCGGCG AGATCGCCGA GATCTTCGAC GTGATGGTCG CGCTCGACGC TGCCGCCGGC
CGCGCGGCGG CCGCGCGCGC CACGGCGGAT GAGATCGCCA GGCTGGATGC GATGCATGAC
GAGCTGGTGG CGCTGCACGG CGCCGCCGAG CGCGCCGCCT ATTTCCGGCT CAACCAGCAG
ATCCACCTCG AGATCACCAG GCTCGCCGGC AACAGCGTGC TGCTCAACAT CTGGAGCACG
CTGCATGCGA GCGTGTTCCG CGCCCGCGCG GTCGCCAATT ACGACGCGCG CCGCTGGGAC
GAGTCGCTGC GCGAACACGA GGCTTTCATG GCGCTGCTGC GCGCCCACGA CGCCCAGGGC
TTCGCGCTGG CGCTCAGCGC GCACACCCGC AAGACCGGGG ATTCCGTGCT GCAGATGCTG
AATCAGGCCA ACAGCGCATA G
 
Protein sequence
MTPSATRPRL KTRFKPTRLK LSSDQSTRPL ARLSLHDQLV AKVREMIIDG ELAAGAPLPE 
RMLCETFGVS RTPLREAFKI LAAEGLIALR PHRTPVVTPI DAGEIAEIFD VMVALDAAAG
RAAAARATAD EIARLDAMHD ELVALHGAAE RAAYFRLNQQ IHLEITRLAG NSVLLNIWST
LHASVFRARA VANYDARRWD ESLREHEAFM ALLRAHDAQG FALALSAHTR KTGDSVLQML
NQANSA