Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6430 |
Symbol | pufM |
ID | 5155442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6699765 |
End bp | 6700691 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561130 |
Product | photosynthetic reaction center subunit M |
Protein accession | YP_001242246 |
Protein GI | 148257661 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.864095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAT ACCAGAACAT CTTCACGCAG ATCCAAGTTC GCAGTAAGAT CTATCCGGGC ATTCCGATCG AGCCCGGAAT CTGGGAGCGG CTCGGCAAGG GCAGCTTCAA CTACTGGTTC GGCAAGATCG GTGACGCCCA GGTCGGCCCG GTGTATCTCG GCTTCCTCGG CCTTGCCTCG CTGATGACCG GCTTCGTCGC GATCGAGATC ATCGGTCTCA ACATGCTGGC CTCGGTGAAC TGGAGCCCGC TCGAGTTCAT TCGCCAGTTC CCCTGGCTGT CGCTGCAACC GCCGGCGCCG GAATACGGCC TGCAGATCTT CCCGCCGCTG CAGGAGGGCG GCTGGTGGCT GATGGCTGGC TTCTTCCTGA CGACGTCGAT CCTGTTGTGG TGGGCCCGCA CCTATCGCCG TGCCCGCGCG CTCGGCCTCG GTACGCACGT CTCCTGGGCG TTTGCGGCGG CGATCTGGCT CTATCTGGTG CTCGGCTTCA TCCGGCCGAT CTTCATGGGG AGCTGGAGCG AGGCGGTGCC GTTCGGCATC TTCCCGCACC TCGACTGGAC CAACAATTTC TCCATCACCC ACGGCAACCT GTTCTACAAT CCGTTCCACA TGCTCTCGAT CGCCTTCCTG TACGGATCGG CGCTGCTGTT CGCGATGCAT GGCGCGACGG TGCTGGCGAT CAGCCGCTAC GGCGGCGAGC GAGAGCTCGA ACAGATCGTC GATCGCGGCA CGGCGTTCGA GCGTGGTGCG CTGTTCTGGC GCTGGACGAT GGGCTTCAAC GCGACCGCCG AATCGATCCA TCGCTGGGCC TGGTGGTTCG CCGTGCTTTG TCCCTTGACC GGCGGCATCG GCATCCTACT CTCGGGCACA GTGGTCGACA GCTGGTTCGA CTGGGGCGTG AAACACGGGC TGGCGCCGAT GCGCTGA
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Protein sequence | MAQYQNIFTQ IQVRSKIYPG IPIEPGIWER LGKGSFNYWF GKIGDAQVGP VYLGFLGLAS LMTGFVAIEI IGLNMLASVN WSPLEFIRQF PWLSLQPPAP EYGLQIFPPL QEGGWWLMAG FFLTTSILLW WARTYRRARA LGLGTHVSWA FAAAIWLYLV LGFIRPIFMG SWSEAVPFGI FPHLDWTNNF SITHGNLFYN PFHMLSIAFL YGSALLFAMH GATVLAISRY GGERELEQIV DRGTAFERGA LFWRWTMGFN ATAESIHRWA WWFAVLCPLT GGIGILLSGT VVDSWFDWGV KHGLAPMR
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