Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6120 |
Symbol | |
ID | 5151192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6347072 |
End bp | 6348013 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560834 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001241953 |
Protein GI | 148257368 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.387063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGT TGCGCCAGGT CGAGGTCATC CGCGCGGTCA TGGTGACGGG CACCATCAAT GGCGCGGCGC GGCTGTTGAA GGTGTCGGCG CCGGGCGTCA GCCGGTTGGT GAAATACACC GAGCGCTCGC TCGGCATCCG CTTTTTCCAG CGCCAGAACG GTCGCTACTT CCCGACCCCC GAGGCGCAGA ACATCTTCGC GCAGATCAAC AGCGTCTACG AGAAGGTCGA CGATCTCAGC TACATCATCT CCAATATCGG TCGCGGCGCG CTGTCTGAGC TGCGCATCGG CTCGGTCCCC AGCATTTCCC AGGTCATGGT GCCGCGCGCG ATCGAGCGCG TCCGCCGCCG CTATCCCGAC CTCGGCATCG ACATCAACAT CCTCAAGATC GAGGAGGCGA TCGACTATCT GATGCTGGGC AAAGGCGAGT GCGTGGCGAT GAGCTACCGC CTCGACCATT CCGCGCTTGA ATTCCTGCCG TTGGCGTCGG GTGAATTGTT CTGCATCGTC CCGCCCGGCC ATGAGCTCGC CGGCCGCAAG CAGGTCTCCG CCGCCGAGAT GACGCGCTAT CCGCTGATCG GCATCGATCC CAACGATCCC TACGGCCGGA TCATGGCGGA GATCTTCGCG CGCAACAGGC TGAGCTACAA CATCTCGATC AAGGCGCGCT TCGGCACCAC GGTCTGTGCG CTCGTGAAGG CCGGGCTCGG CATCGCGGTC ATCGACCAGT TCACGGTGGC GCATGGCGGC TATCCTGGCA TCGAGCTCAT CAAGATCGCC GAGCCGACCC GTTTCGACAC CTACATCGCC GTCAAGCGTG GAACGCCATT GTCGCTCTAT GCCGAGCACT TCATCGATTG CCTGCGCGCC GAGATGCGCG CGGTGGAGCC GGGCCGGCGC GCGGCGGCGA AGCCCGCCAA GGCGCCTGCC GGCAAAAGAT AA
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Protein sequence | MMTLRQVEVI RAVMVTGTIN GAARLLKVSA PGVSRLVKYT ERSLGIRFFQ RQNGRYFPTP EAQNIFAQIN SVYEKVDDLS YIISNIGRGA LSELRIGSVP SISQVMVPRA IERVRRRYPD LGIDINILKI EEAIDYLMLG KGECVAMSYR LDHSALEFLP LASGELFCIV PPGHELAGRK QVSAAEMTRY PLIGIDPNDP YGRIMAEIFA RNRLSYNISI KARFGTTVCA LVKAGLGIAV IDQFTVAHGG YPGIELIKIA EPTRFDTYIA VKRGTPLSLY AEHFIDCLRA EMRAVEPGRR AAAKPAKAPA GKR
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