Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6060 |
Symbol | |
ID | 5155274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6280102 |
End bp | 6281346 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640560772 |
Product | Bcr/CflA family drug resistance transporter |
Protein accession | YP_001241893 |
Protein GI | 148257308 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGACA CCAGTGCCGA CATCGAGATC GTCCGCCATC GGCCGATGGG GTTCGCCGAA TTCGTGATCG TCATCGCGGC GATCATGGCG CTTAATCCGC TGGCCATGGA CATGATGCTG CCGGCCCTGC CGAACATCGG CTCGACGTTC CACATCGACG TCGCCAACCG TGTGCAGACG GTGCTGTCGG CGTTCGTCAT CGGCTTCGGG CTCGGCCAGT TCGCGATCGG CCCGCTGTCG GACAGCTTCG GCCGCCGCCC GGTCCTGATC GGCGGCATGG TGCTTTACGT GCTGGCAAGC TTGTTCGCGA TTGCCGCTCC GTCGTTTGAA ATGCTGCTGC TGGCGCGCGC ATTGGAGGGC CTCGGAACGG CCGCCACGCG CGTGATCGCG ACCTCGATCG TGCGCGACTG CTATGCCGGC CGCCGCATGG CGAGCGTGGT GTCGCTGGCG ATGATGGTGT TCATCGCGGT GCCCGTGGTC GCGCCGTCGT TCGGCCAGGC CGTGATGATT CTGACGCAAT GGCGCGGCAT CTTCATCGTG CTGACGATCT ATGGCGTCGT CGCGCTGTTG TGGACCGCAG CCCGTCTCCC CGAGACGCTA CCAGAAAACG AGCGCAAGCC GTTCTCCGTC GCCGAAATCA CGGCCTCCTT CCGCAAGACG CTGACCGACC GCCAGACCCT CGGCTACGCA CTTGCCGCCA GCGGCGTGTT CGGCGCGCTG TTCGGCTACG TGCTGTCGTC GCAGCAATTG TTCACCGGCG TCTATCATCT CGGCCATTAC TTCCCGCTCG CCTTCGCGGC GATCGCGGTG ACCATTGCGC TCGCGGGCTT TCTCAATGCC CGGCTGGTCG GCCGTCTCGG CATGCGCGTG ATCTCCCATG GCGCGCTGGT CGGCAGCGTC GTGATCGCGT TGGCCTGCTT CGCTGCTGCC ATGCTCGGCA CCTTGCCGCT GTGGCTGTTC ATGACGCTGT CGGCGGCGAT GATGTTCTCG TTCGGCCTCA CCTTCGCGAA TTTCACGGCG CTGGCGCTGG AGCCGCAGCG CGCCAATGCG GGCACGGCGT CCTCGATCTA CGGCTCGATC ACAACGCTGC TCGGCATGGC CGCCGGCGCG GTCGTGGGCC AAGCCTTCGA CGGCACGGTC GTGCCGTTCG CAACCGGCTT CCTGGCCTGC ACGGCCAGCG CACTCATCAT CGTGCTGATC ACCGAGAAGG GCCGGCTGTT CCGCAGCCAT CATAAGCCAG TCTGA
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Protein sequence | MTDTSADIEI VRHRPMGFAE FVIVIAAIMA LNPLAMDMML PALPNIGSTF HIDVANRVQT VLSAFVIGFG LGQFAIGPLS DSFGRRPVLI GGMVLYVLAS LFAIAAPSFE MLLLARALEG LGTAATRVIA TSIVRDCYAG RRMASVVSLA MMVFIAVPVV APSFGQAVMI LTQWRGIFIV LTIYGVVALL WTAARLPETL PENERKPFSV AEITASFRKT LTDRQTLGYA LAASGVFGAL FGYVLSSQQL FTGVYHLGHY FPLAFAAIAV TIALAGFLNA RLVGRLGMRV ISHGALVGSV VIALACFAAA MLGTLPLWLF MTLSAAMMFS FGLTFANFTA LALEPQRANA GTASSIYGSI TTLLGMAAGA VVGQAFDGTV VPFATGFLAC TASALIIVLI TEKGRLFRSH HKPV
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