Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5929 |
Symbol | sufD |
ID | 5152250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6145094 |
End bp | 6146419 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560654 |
Product | sufD, needed for fhuF Fe-S center production/stability |
Protein accession | YP_001241776 |
Protein GI | 148257191 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGTCG CGATCCGCAA GACCAAGGCC GAACTCGGAC TGGCCGATCT GTATCAGGGC GCCCGCCGCT ATCTGCCGGG CGGTGAGGAG ATCACGGCGG TGCGTGCCGC AGCCTTCGAC CGCTTCGACG CGGTCGGCCT GCCGCACCGG CGTGTCGAGG CCTGGCGCTA CACTGATTTG CGCACGCAGA TGAAGGAGGC CAAGCGCCTC GCCTCGCTGC CCGACGATGC CGCCAAGACC AAAGCACGCG AAGCGAGCAA TCTGTTTGCG GGCGCCGGCT TCCGCAAGCT TGTCATCGTC GATGGCGCCT TCGTGCCCGA ACTGTCCGAT CTCGCCGATC TCGAGCCGGG CCTGACGATC CAGCCGATGG CCGATGCACT CGCGGCCGAC CAGCCGCTGC TGTTGCAACG CCTCGGTCCG GTGGTGCCAG ACGATGATCC GGCGCTGGCG CTCAACACCG CGCTGGCCGC CAATGGCGTC GTGATCCTGG TCGCGCCGGG CACCGCGCTG AGCCGGCCGA TCCATGTCGC CTTCGTCACG ACCAACTGGG TCGCGACCTC GATGTTCACC CGCTCGCAAG TCAATATCGG CGCGGGCGCC AGCGCCACCC TCGTCGAGTC GCATCAGGGG CCCGACGGCA CCGAATATCA GGTCAACACC GCCCTGCAGC TCGTCGTCGG CGACGAGGCG CGGATCGACC ATGTCAAGGT CGTGACCGAG GGCAACGGCG CGCTGCATAT CTCATCGCTT CTGGCCAATA TCGGCGCACG CGCGACCTTC AACCAGCTCG GCTTCGTCGC TGGCGGCAGC CTGGTGCGCA ACCAGCTGTT TGTGCACATC GCGGGCGAGG GCACCGTGGC CGACATCCGC GGCGGCTCGC TGCTGGCGGG TGCCCAGCAT GCCGACACCA CCTTGGCGAT CGAGCATGCC GCCGAGAACT GCCAGAGTCG CGAGACCTTC AAGGCCGTGG TCGGCGACAC CGCGCGCGCG GTGTTCCAGG GCAAGATCAC GGTCAGCCCG GGCGCGCAGA AGACCGACGC CAAGATGATG TCACGGGCGC TGCTGCTGTC CGACGAGGCC GAGGCCGACT CGAAGCCGGA GCTCGAGATC TTCGCCGACG ATGTGCAGTG CGGCCACGGC ACCACGACCG GCGCGATCGA TGACGAGCTG CTGTTCTATC TGATGGCGCG GGGCATTCCG CCTGACGAAG CGAAGGCGCT GCTGATCCAG GCCTTCATCG GCGAGATCAT CGAGGGCGCG GCCAATGAGA GCGTCAGGGC TGCGCTGACC GAGGCGATGC TGGGCTGGCT CGGACGACGG GAGTAG
|
Protein sequence | MGVAIRKTKA ELGLADLYQG ARRYLPGGEE ITAVRAAAFD RFDAVGLPHR RVEAWRYTDL RTQMKEAKRL ASLPDDAAKT KAREASNLFA GAGFRKLVIV DGAFVPELSD LADLEPGLTI QPMADALAAD QPLLLQRLGP VVPDDDPALA LNTALAANGV VILVAPGTAL SRPIHVAFVT TNWVATSMFT RSQVNIGAGA SATLVESHQG PDGTEYQVNT ALQLVVGDEA RIDHVKVVTE GNGALHISSL LANIGARATF NQLGFVAGGS LVRNQLFVHI AGEGTVADIR GGSLLAGAQH ADTTLAIEHA AENCQSRETF KAVVGDTARA VFQGKITVSP GAQKTDAKMM SRALLLSDEA EADSKPELEI FADDVQCGHG TTTGAIDDEL LFYLMARGIP PDEAKALLIQ AFIGEIIEGA ANESVRAALT EAMLGWLGRR E
|
| |