| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5673 |
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| Symbol | lpcC |
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| ID | 5156200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5918857 |
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| End bp | 5919903 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640560411 |
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| Product | lipopolysaccharide core biosynthesis mannosyltransferase |
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| Protein accession | YP_001241533 |
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| Protein GI | 148256948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.108379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCCG AGCCGTTTTC CGCCGCCGAT CTCGACGTGA TCGTGCCGAA CCTGCACCGG
CGCTATTCCG GCGTGACGGC GACGAACCGC ATGGTGGCGC CGAAGCTCGC GCGCCGGGTG
CGTGCGGCAT GGCTCGGCAC CTACGCGCCG GACGGGATTG CGCGCATGCA GGCGAGCGAT
CTCGTCATGC TGTGGCGCCG CCGCCGTCCG CTGATCTGGC ATGCGCGCCG CAACAACGAA
ATGATTGCCG GCGTGATCCT GCGCGCGCTC GGCTGGCCGC TGAAGCTGGT GTTCACCTCG
GCGGCGCAGC GTCATCACAG CTGGATCACG CGCTGGCTGA TCCGCCGCAT GGACGCGATC
ATCGCCACCA GCGACATCTC GGCGTCCTAT CTGAAGCGCG AGGCGACGGT GGTGACGCAT
GGCGTCGATA CCGACATCTA CGCGCCGCCT GCGGATCGCG CCGCCGCCTT CGCCGAGAGC
GGCCTGCCGG GACGATACGC GATCGGCTGC TTCGGTCGCG TGCGTGCGCA GAAGGGCAGC
GACGTGTTCG TTGCCGCGAT GTGCCGGCTG TTGCCGCGCT ATCCGGATTT TTCGGCCGTG
CTGGTCGGCG CCGTCACGCC GGAGCAGCTG CCGTTCGCGG GCGAGTTGCG CAAGCAGATC
GCCGCGGCGG GCCTGGAGCA GCGCATCGTC ATCACCGGCG AGCTCGACAT CGCCGAGGTG
CAGCGCTGGT ATCAGCGGCT GACGATCTAC GCCTTCACCT CGCGCAATGA AGGCTTTGGC
CTGACCTTGA TCGAGGCGAT GGCCGCCGGC GCGGCGCTGG TGGCGGCGCG CGCCGGTGCT
GCAGAGATCG TGGTCGAGGA GGGCGTCACC GGCGTGCTGG TGCCGCCCGG CGATGTCGAG
GCGCTGGTTG CGGCGCTCGA ACCGCTGATG CGCGATCCAG CCGCGGCGCG CGCGATGGGA
GAGCGGGCGC GGACACGCGT CATCGAGAGG TTCAGCCTCG AGGCCGAGGC CGACAAGATC
GCCGCCGTCT ATCGCCGGCT GGTCTGA
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| Protein sequence | MPAEPFSAAD LDVIVPNLHR RYSGVTATNR MVAPKLARRV RAAWLGTYAP DGIARMQASD
LVMLWRRRRP LIWHARRNNE MIAGVILRAL GWPLKLVFTS AAQRHHSWIT RWLIRRMDAI
IATSDISASY LKREATVVTH GVDTDIYAPP ADRAAAFAES GLPGRYAIGC FGRVRAQKGS
DVFVAAMCRL LPRYPDFSAV LVGAVTPEQL PFAGELRKQI AAAGLEQRIV ITGELDIAEV
QRWYQRLTIY AFTSRNEGFG LTLIEAMAAG AALVAARAGA AEIVVEEGVT GVLVPPGDVE
ALVAALEPLM RDPAAARAMG ERARTRVIER FSLEAEADKI AAVYRRLV
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