Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5583 |
Symbol | |
ID | 5154071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5807775 |
End bp | 5808500 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560326 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001241448 |
Protein GI | 148256863 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.42685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCAG CGGTAGCTGT CGAGGGGCAG GTCCCGGCGA CCCAGGCAAG CCATGTCTAT GATCGGCTGC GCGAGGACCT ACTGTCCGGG CGGCTTGCAC CGTCGCGCAA GCTGCAGATG CGTTTCCTGA CCGAGACCTA TCAGACCGGG CAGACACCGC TGCGCGAGGC GCTCAACCGG CTGACAGCTG ACGGCTTGGT CGAGGTGCGC GAGCAGCGCG GCTTCTACGT CAAGGACATC AGCCGCGCCG AGCTCGCCGA ACTGACCAAG ACGCGCTGCT GGGTCGAGGC GCTGGCATTG CGCGAGTCGA TGGCGGCGGC GACGCCGCAA TGGGAGGAGC AACTGGTGCT GGCCCAGCAT CGCCTCAGCC GGGCGCCGCG CTCGCTCAAT GCCACCGCGT TCGAGGACAA TCCGGAGTGG GAGCGGCTGC ACCGCATCTA TCACCGCGTC CTGATTTCGA ACTGCGGCTC GCAATCCCTG ATCGGCTTCT GCGGCCAGCT CGCCGACCAG CTCTACCGCT ATCGGCGGCT GTCGATCCGC AAGGCGTTTC CGTCACGCGC GGTCGGCGAC GAGCACGCTG CGATCGTCGA GACGGTCCTG AACGGGGATA TCGAGCGCGC GGTGCAGCTG TTGACGGCGC ACTACCAGCG CACCGCCGAC GTCATCCTGC AGGACGAGAC CATCTTTCCG GAGCTGCGAG ACCGCGGCCC CGGGAAAGGT GAGTAG
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Protein sequence | MDAAVAVEGQ VPATQASHVY DRLREDLLSG RLAPSRKLQM RFLTETYQTG QTPLREALNR LTADGLVEVR EQRGFYVKDI SRAELAELTK TRCWVEALAL RESMAAATPQ WEEQLVLAQH RLSRAPRSLN ATAFEDNPEW ERLHRIYHRV LISNCGSQSL IGFCGQLADQ LYRYRRLSIR KAFPSRAVGD EHAAIVETVL NGDIERAVQL LTAHYQRTAD VILQDETIFP ELRDRGPGKG E
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