| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5557 |
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| Symbol | |
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| ID | 5153021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5780455 |
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| End bp | 5781588 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560300 |
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| Product | putative ABC transporter (permease protein) |
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| Protein accession | YP_001241422 |
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| Protein GI | 148256837 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.396746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGCG ACCCTGATCT GCAACGCAGT GGCGAGGGCA GTGCACTGTC GCTGCGCGCG
ACGGGCGCCT GGACCGCGCC GTTTGCGCCG TCGCTCGAGC GGCTCGTCGC CGATGCGGAG
AAGCTCGCCG GCAAGAAGAT CGATGTGTCC ATCGATGTGT CGGAGGTCTC CAGGCTCGAT
ACGTTCGGCG CCTGGCTGAT CGAGCGGCTG CGCCGCAGCT TCACGACGGG AACCGCCGAG
GCCAGGATCG ATGGCCTGTC GGCGAACTAT GCCAGTCTGG TCGACGAGGT CCGCCGCGTC
AGCGCCGCGC CCGACGGCGA TGCGACGGCG GTGACCATCA CCGGCATGCT CGGCCAGATT
GGCCGCAGCG TCGCCGGCAT CTTCGGCACA GTGGCCGCCC TGATCGACAT GCTCGGCGCC
GTGATCGTCG CCAGCGGCCG GGTGTTCATC CATCCGCGCA GCTTCCGCCT GACCTCGACG
ATCCATCATC TCGAGCAGGT GTGCTGGCGC GCTGTTCCAA TCATTGTGCT CATCACCTTC
TTGATCGGCT GCATCATCGC CCAACAGGGC ATCTTTCATT TCCGCAGGTT CGGCGCCGAC
ATCTTCGTTG TCGACATGCT CGGCGTGCTG GTGCTGCGCG AGATCGGGGT GTTGCTGGTC
GCGATCATGA TCGCGGGCCG GTCGGGCAGC GCCTATACGG CCGAACTCGG CTCGATGAAG
ATGCGCGAGG AGATCGATGC GCTCAGGACC ATGGGCTTCG ATCCGATCGA GGTGCTGATC
CTGCCGCGCA TGCTGGCGCT GGTGATCGCG CTGCCGATCC TGTCCTTCCT GGGCGACATC
GCTGCGCTCT ATGGCGGCGG GCTGGTGGCG TGGTTCTATG GCGGCGTCGA TCCCGAGGCG
TTCCTGCTGC GCCTGCGCGA AGCGATCTCG ATCGACCATT TCACCGTGGG CCTGCTCAAG
GCGCCGGTGA TGGCGGCGGT GATCGGGATC GTTGCCTGCG TCGAGGGGCT CGCGGTGCAG
GGCAGTGCGG AGTCCTTGGG GCGCCACACC ACGTCCTCGG TGGTCAAGGG AATCTTCTTC
GTCATCGTGA TGGACGGCGT GTTCGCGATC TTCTTTGCGA CGGTCGGGAT GTAA
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| Protein sequence | MTGDPDLQRS GEGSALSLRA TGAWTAPFAP SLERLVADAE KLAGKKIDVS IDVSEVSRLD
TFGAWLIERL RRSFTTGTAE ARIDGLSANY ASLVDEVRRV SAAPDGDATA VTITGMLGQI
GRSVAGIFGT VAALIDMLGA VIVASGRVFI HPRSFRLTST IHHLEQVCWR AVPIIVLITF
LIGCIIAQQG IFHFRRFGAD IFVVDMLGVL VLREIGVLLV AIMIAGRSGS AYTAELGSMK
MREEIDALRT MGFDPIEVLI LPRMLALVIA LPILSFLGDI AALYGGGLVA WFYGGVDPEA
FLLRLREAIS IDHFTVGLLK APVMAAVIGI VACVEGLAVQ GSAESLGRHT TSSVVKGIFF
VIVMDGVFAI FFATVGM
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