Gene BBta_5542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5542 
Symbol 
ID5153273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5762213 
End bp5762800 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID640560286 
Producthypothetical protein 
Protein accessionYP_001241408 
Protein GI148256823 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.286849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC GCACGCTGCG CATGCCCGAC GACGTCGAGA TCGCGGCGAT CTCGACGCGG 
CACTTCGCCG ACACGCCGCT GCGTCCCGCC GACCTCCTGT TCGTGTTCGG CACGCGGGTC
GAGGAGGAGC TGCGCGCGGC CACGGCCGCG CGGCTGTGGG AGCAGGGCTA TTTCCGTCAC
GCCATCGTCA GCGGCGGGGT CACACCGGGA GCTGAGGCCT CCGAATGTGC GCTGATCAAG
GATGCGATGG TCAGGCGCGG CGTTCCCGCC GACCGCATTC TCGAAGAGCA CCACGCCATG
AACACCGGCG AGAATGTGCT GCTCTCGCTG CCGGTGATCG ACACGGCGCT CGGCCTCGCC
AATGTCCGGA CCGTGATCTG CCTCGGCAAC AGCTGGACCG CGCGGCGCTA TGCGATGACG
CTGCAGCGGC ACTGGCCGGA AGTCGAGAAG ATGCTCCTGA CGGTGGATAG TTTCGGCGTG
CCGCGCCAGC TCTGGCACAC CCATCCCGAA TTCCGCCGCC GCGTGCTCAG TGAATGGGAC
AAGATCGCGC CGTACAAGGC GAAGGGTTTC ATTGCGGATT GGCCGTGA
 
Protein sequence
MADRTLRMPD DVEIAAISTR HFADTPLRPA DLLFVFGTRV EEELRAATAA RLWEQGYFRH 
AIVSGGVTPG AEASECALIK DAMVRRGVPA DRILEEHHAM NTGENVLLSL PVIDTALGLA
NVRTVICLGN SWTARRYAMT LQRHWPEVEK MLLTVDSFGV PRQLWHTHPE FRRRVLSEWD
KIAPYKAKGF IADWP