Gene BBta_5453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5453 
SymbolrecA 
ID5149805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5676168 
End bp5677256 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID640560202 
Productrecombinase A 
Protein accessionYP_001241324 
Protein GI148256739 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.658876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.17766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CCGCCCTGCG TATCGTCGAA GGTTCCTCAA TGGATAAGAG TAAGGCGCTC 
TCCGCTGCGC TGTCCCAGAT CGAGCGTCAG TTCGGCAAGG GCTCGGTGAT GAAGCTGGGC
AAAAACGACC GCTCGATGGA TGTCGAGACG GTGTCGACCG GTTCGCTCGG GCTGGACATC
GCGCTCGGGA TCGGCGGTCT GCCGAAGGGG CGGGTGATCG AGATCTATGG GCCGGAATCG
TCGGGCAAGA CCACTCTGGC CTTGCACACC GTCGCCGAGG CTCAGAAGAA GGGCGGCATC
TGCGCCTTCA TCGATGCCGA GCATGCGCTC GATCCGGTCT ATGCGCGCAA GCTGGGCGTC
AACATCGACG AGCTGCTGAT CTCCCAGCCG GATACCGGCG AGCAGGCGCT GGAGATCTGT
GACACCCTGG TTCGTTCCGG CGCGGTCGAT GTGCTGGTGG TCGACTCGGT GGCGGCGCTG
GTGCCGAAGG CCGAGCTCGA GGGCGAGATG GGCGAGTCGC TGCCGGGCCT GCAGGCCCGC
TTGATGAGTC AGGCGCTGCG CAAGCTCACA GCCTCCATCA ACAAGTCCCA TACCATGGTG
ATCTTCATCA ACCAGATCCG CATGAAGATC GGTGTGATGT ACGGCTCGCC GGAAACCACC
ACAGGCGGCA ACGCGCTCAA ATTCTACGCC TCGATCCGTC TCGACATCCG CCGCATCGGC
GCGATCAAGG AGCGCGATGA GGTGATCGGC AACACGACCC GCGTCAAGGT GGTCAAGAAC
AAGCTGGCGC CGCCGTTCAA GCAGGTCGAG TTCGACATCA TGTATGGCGA GGGCGTGTCG
AAGATGGGCG AGATCCTCGA TCTCGGCGTC AAAGCCGGCA TCGTCGAGAA GTCCGGTGCC
TGGTTCTCCT ATGACAGCCA GCGGCTCGGG CAAGGGCGCG AGAATTCGAA GTCGTTCCTC
AAGGCCAACC CCGATATGAC GGCGAAGATC GAGGCCGCGA TCCGCCAGAA CTCCGGCCTG
ATCGCCGAGC AGATCCTGGC CGGCAACGCG GAGCGCGATG CCGACGGTGA GGAGCCGGCG
GAGGAGTAG
 
Protein sequence
MSATALRIVE GSSMDKSKAL SAALSQIERQ FGKGSVMKLG KNDRSMDVET VSTGSLGLDI 
ALGIGGLPKG RVIEIYGPES SGKTTLALHT VAEAQKKGGI CAFIDAEHAL DPVYARKLGV
NIDELLISQP DTGEQALEIC DTLVRSGAVD VLVVDSVAAL VPKAELEGEM GESLPGLQAR
LMSQALRKLT ASINKSHTMV IFINQIRMKI GVMYGSPETT TGGNALKFYA SIRLDIRRIG
AIKERDEVIG NTTRVKVVKN KLAPPFKQVE FDIMYGEGVS KMGEILDLGV KAGIVEKSGA
WFSYDSQRLG QGRENSKSFL KANPDMTAKI EAAIRQNSGL IAEQILAGNA ERDADGEEPA
EE