Gene BBta_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5402 
Symbol 
ID5150049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5625308 
End bp5625790 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID640560158 
Producthypothetical protein 
Protein accessionYP_001241282 
Protein GI148256697 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.925315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACC TGTCCCGTTC CGCCTTCGAG AACCGACCCG GCATCCACAT CGCGACCGAC 
GGCGAGTTCG CCGGCTGGCG CACCTGGCTG CGCGACAGCT ACGAATCCCA TACCGGTCCG
TTCTGGCACC GGATGGAGGA GGATGGCTCG ATCCGCTGCG CCTTCCGGGT CGAGAAGAAG
CATCTCAATG GCGGCGGCAA CGTCCATGGC GGCTGCCTGA TGACCTTCGC CGATTACTGC
CTGTTCGCCT TCGCCGCGCC GATCCTGCAG GGCCCGGGCG TGACCGTGTC GTTCTCGTCG
GAATTCCTCG ACGCCGCACG CGAGGGTGAG TTGATCGAAG CCACCGGCGA GGTCACCCGC
GCCGGCGCCT CGCTGATCTT CCTCCGCGGC ATGCTGCATT CCGGCACCCG GCCGCTGTTC
TCATTCTCCG GCACGATCAA GCGGGTGAAG CGGCGCACAC CGGACGCGGC GAATTCGCCG
TAG
 
Protein sequence
MHDLSRSAFE NRPGIHIATD GEFAGWRTWL RDSYESHTGP FWHRMEEDGS IRCAFRVEKK 
HLNGGGNVHG GCLMTFADYC LFAFAAPILQ GPGVTVSFSS EFLDAAREGE LIEATGEVTR
AGASLIFLRG MLHSGTRPLF SFSGTIKRVK RRTPDAANSP