Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5373 |
Symbol | |
ID | 5150178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5597330 |
End bp | 5597860 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640560130 |
Product | putative nuclease-like protein |
Protein accession | YP_001241254 |
Protein GI | 148256669 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0199446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGATATT CACTTCTCTT CGTCTGCGGG GCTCTGCTGC TGGCTGCCGC GCCTTCTGCC GTCGCGCGCG ACCTTGTTGG CCGCGGCAGC ATCGTCGATG GCGATACGCT GGATCTTCAC GATCAGCGCA TTCGTCTGTG GGGCATCGAC GCGCCGGAGA GCGCGCAATT GTGCCGCGGC CGCGACCGCA AGCCATATCG CTGCGGCGCG CTCGCCGCCA ACACGCTCGA CGCGTTCACC CGCGGCAAGA CCATCCGCTG CATGCCCGTG GATGGCGACC GTTATGGCCG CGTCGTCGCG CGCTGCGCGG CCGGCGGTGT CGATCTCGGC CAGTTCATGG TGTCGCGCGG GCTTGCATTG GAGGAGCCGC AATATTCCCA CGGTCATTAC GCGGCCGATC AGGTCGCAGC CCGCCGTGCC GGGCGCGGCG TGTGGTCCGG CCGCTTCGTC GAGCCGTCAC TCTATCGCAG CTGCATGCAC GCCGCCGGCA CGCGGTCCGT CTGCTCGGAA GGCGCGACCG GCTGGCGATG A
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Protein sequence | MRYSLLFVCG ALLLAAAPSA VARDLVGRGS IVDGDTLDLH DQRIRLWGID APESAQLCRG RDRKPYRCGA LAANTLDAFT RGKTIRCMPV DGDRYGRVVA RCAAGGVDLG QFMVSRGLAL EEPQYSHGHY AADQVAARRA GRGVWSGRFV EPSLYRSCMH AAGTRSVCSE GATGWR
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