| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5332 |
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| Symbol | rpe |
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| ID | 5155988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5561682 |
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| End bp | 5562383 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560094 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_001241218 |
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| Protein GI | 148256633 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.671613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGT CCTTCACGCC GCGTCCGCTC GTCATCGCGC CATCGATCCT GGCGTCCGAT
TTTTCCAAGC TTGGCGAGGA GGTGCGCGCC GTCGATGCCG CCGGCGCCGA CTGGATCCAT
CTCGATGTGA TGGACGGCCA TTTCGTGCCG AACATTTCCT ACGGCCCCGA TGTGATCAAG
GCGCTGCGCC CGCACACCAC GAAGATCTTC GACGCACATC TGATGATCAC GCCGTGCGAT
CCCTACCTCG AAGCCTTCGC CAAGGCCGGC TGCGACCACA TCACGGTGCA TGCCGAGGCC
GGCCCGCATC TGCATCGCTC GCTGCAGGCG ATCCGCGCGC TCGGCAAGAA GGCCGGCGTG
TCGCTCAACC CGTCGACCCC GCTCAACGTG ATCGAGTATG TGCTCGACCT GGTCGACCTC
GTGCTGATCA TGTCGGTCAA CCCCGGCTTC GGCGGCCAGG CCTTCATCCC CTCGGCAATC
GGCAAGATCC AGGATCTGCG CGCGATGACC GCGGGCCGGC CGATCGATAT CGAGGTCGAT
GGCGGCGTCG GCCGCGACAA TGCCGGCGCG CTCGCCGCGG CTGGCGCCAA TGCCTTCGTC
GCCGGCTCCG CCGTGTTCAA GGGTGGCACG ATGGAGGCCT ATCGCGGCAA CATTTCCGCC
ATCCGCAGCG CCGCGGCGTC GGCGCGCGGC GAAGCGATCT GA
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| Protein sequence | MTQSFTPRPL VIAPSILASD FSKLGEEVRA VDAAGADWIH LDVMDGHFVP NISYGPDVIK
ALRPHTTKIF DAHLMITPCD PYLEAFAKAG CDHITVHAEA GPHLHRSLQA IRALGKKAGV
SLNPSTPLNV IEYVLDLVDL VLIMSVNPGF GGQAFIPSAI GKIQDLRAMT AGRPIDIEVD
GGVGRDNAGA LAAAGANAFV AGSAVFKGGT MEAYRGNISA IRSAAASARG EAI
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