Gene BBta_5315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5315 
Symbol 
ID5153072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5544231 
End bp5545436 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID640560078 
Producthypothetical protein 
Protein accessionYP_001241202 
Protein GI148256617 
COG category[R] General function prediction only 
COG ID[COG3552] Protein containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.333128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCA GCATCAATCA CCTCGCACCA CCCACCGGCG GCATTGCCGA CAACATTGCA 
GGCTTTGCGC GGGCGCTGCG TGCAGCAGGT CTTCCGGTCG GGCCAGGCGC TGTGATCGAT
GCCATGACCG CGCTCGAGGT CATCGACATC GGCAAGCGCG CGGACGTCTT CACCACGCTG
GAATCGATCT TCGTCAAGCG CCATGAGCAC GCGCTGATCT TCGCCCAGGC CTTCGACCTG
TTCTTCCGCC CCGCCGAGGA GTGGAAGTCG ATGCTCGATT CCGTGCCGCT GCCGGATCAC
GCCAAGAAGA AGCCGCCGCC GGCGTCGCGC CGGGTGCAGG AGGCGATGGC CCAGCCGCAG
ATGCATGAGG AGCCGAAGGC GCAGGAGCAG GATCTGCGGC TGTCGGTGTC CGACCGCGAG
GTGCTGCAGA AGAAGGATTT TGCCCAGATG AGCGCGGCCG AGATCGCCGA GGTCGCGCGC
GCGATCGCCA AGATGCGGCT GCCGCAGGCC GAGCTGAAGA CGCGCCGCCA CACCACAGAT
CCCCGCGGCC ACCGCATCGA CATGCGCAAG ACCTTGCGGC AGGCGCTGCG CACCGAGGGC
GAGATCATCA ACTTCCATCG CCTGGGACGG ATCGAGAAAC CGGCGCCGAT CGTGGCGCTG
CTCGATATCT CCGGCTCGAT GAGCGAATAC ACCCGCCTGT TTCTGCATTT CCTGCACGCC
ATCACCGACG CCCGCAAGCG CGTGTCGGTG TTCCTGTTCG GCACCAGGCT GACCAACGTG
ACGCGGGCGC TGCGGCAGCG CGATCCGGAC GAGGCGCTGG CGAGTTGCTC GGCCAATGTC
GAGGACTGGG CCGGCGGCAC CAGGATCGCC ACCTCGCTGC AGACCTTCAA CAAGCAATGG
GCGCGGCGCG TGCTCGGGCA GGGCGCGATC GTGCTCCTGA TCTCTGACGG GCTCGAGCGC
GAGGCCGACA GCAAGCTCGC CTTCGAGATG GACCGCCTGC ACCGCTCCTG CCGCCGCCTG
ATCTGGCTCA ACCCGCTGCT GCGCTATTCC GGCTTCGAGG CCAAGGCGCA GGGCATCAAA
ACCATGCTGC CCCACGTTGA CGAATTCCGC CCCGTACATA ACTTGACCTC GATCGAGACG
CTGATCTCGG CGCTGTCATC GCCGCTCCCG CCGCACATCA GCCGCGTGAT CCGGCCCGCC
GCCTGA
 
Protein sequence
MPTSINHLAP PTGGIADNIA GFARALRAAG LPVGPGAVID AMTALEVIDI GKRADVFTTL 
ESIFVKRHEH ALIFAQAFDL FFRPAEEWKS MLDSVPLPDH AKKKPPPASR RVQEAMAQPQ
MHEEPKAQEQ DLRLSVSDRE VLQKKDFAQM SAAEIAEVAR AIAKMRLPQA ELKTRRHTTD
PRGHRIDMRK TLRQALRTEG EIINFHRLGR IEKPAPIVAL LDISGSMSEY TRLFLHFLHA
ITDARKRVSV FLFGTRLTNV TRALRQRDPD EALASCSANV EDWAGGTRIA TSLQTFNKQW
ARRVLGQGAI VLLISDGLER EADSKLAFEM DRLHRSCRRL IWLNPLLRYS GFEAKAQGIK
TMLPHVDEFR PVHNLTSIET LISALSSPLP PHISRVIRPA A