Gene BBta_5278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5278 
Symbol 
ID5150831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5507507 
End bp5508733 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content69% 
IMG OID640560045 
Producthypothetical protein 
Protein accessionYP_001241169 
Protein GI148256584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.306023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.251543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CCGTCCCGAT CGGCGCGCGC GATCTGTTGA AGCAAAGCGC GTTCCTGTTC 
TTCCTGTCGT CCCGCAGCCT GTCGCGCTTC GCGAGCCAGA TCGCGGCGGT GGCGATCGGC
TGGCAGATCT ACGATCTGAC GGGACGGGCC TTCGATCTCG GCATGGTCGG GCTGATCCAA
TTCCTGCCCA CGGCATTGCT CGTTTTCGTC GCCGGCAGCG CCGCCGATCG TTTTCAGCGC
AAGCGCGTGG TGCAGCTCTG CCAGCTCGCT GAGGCGCTCA CCGCGCTTTA TCTGTGCTGG
GGGGCCTCCG CCGGCCAGCT CGGCGAAATC CAGCTGTTCG CAGCCACCTT CGTGCTCGGC
ATCGCCGGGG CATTCGAGAG CCCGGCGACC GCGGCGCTGC TGCCGCTGAT CGCGCCGGAA
GGCACGTTGC AGCGGGCGAG CGCGCTGTCG AGCGGTGCAG CGCAGCTCGC GACCATCGCC
GGCCCTGCCA TCGGCGGCTT CGCCTATGCG GTCGCGCCCG GACTGCCCTA TGGCGTCATG
ATGCTGTTCT GGCTCGCCGG CATGGCGCTG ACCGGCCTGA TGCAGGTGCC GGACGACGTG
CCGGCCGAGC GCCTCGATGG CAGCAAGGAT GACCTGTTCG CCGGCGTCCG CTTCATCCGC
GCCAACCCGG CGATCCTCGG CACCATCTCG CTCGACCTGT TTGCGGTGCT GCTCGGCGGC
GTCACGGCGC TGCTGCCGAT CTATGCGCGG GACATTCTCG ACACCGGGCC GTTCGGCCTC
GGCGTGCTGC GCGCGGCGCC CGCGGTCGGC GCGCTGGCGA TGACGGCTGT GCTGGCGCGC
TATACGATCA GGCGGCGTGT CGGCCTGCGC ATGTTCCAGG CCGTGATCGT GTTCGGTGCC
GCCACGGTCG TGTTCGCCCT GTCGCATGTG ATGTGGGTGT CGGTCCTCGC ACTCGCCGTT
CTCGGCGCCG CCGACACGAT CAGCGTCGTC ATCCGCTTCT CGCTGGTGCA GCTCGCCACG
CCGAACGAGA TGCGCGGCCG GGTCGGCGCG GTGAACTTCC TGTTCATCAA CGCCTCCAAC
CAGCTCGGCC AGTTCGAGAG CGGCGTCACC GCCGCGCTGT TCGGCGCCAT GCCCGCCGCC
GTGCTCGGCG GCCTCGGCAC CATCGCGATC GCGCTGTTGT GGATGAAGCT GTTTCCAACG
CTGCGCAAGG TCGAGCGGCT GGAGTAG
 
Protein sequence
MSTTVPIGAR DLLKQSAFLF FLSSRSLSRF ASQIAAVAIG WQIYDLTGRA FDLGMVGLIQ 
FLPTALLVFV AGSAADRFQR KRVVQLCQLA EALTALYLCW GASAGQLGEI QLFAATFVLG
IAGAFESPAT AALLPLIAPE GTLQRASALS SGAAQLATIA GPAIGGFAYA VAPGLPYGVM
MLFWLAGMAL TGLMQVPDDV PAERLDGSKD DLFAGVRFIR ANPAILGTIS LDLFAVLLGG
VTALLPIYAR DILDTGPFGL GVLRAAPAVG ALAMTAVLAR YTIRRRVGLR MFQAVIVFGA
ATVVFALSHV MWVSVLALAV LGAADTISVV IRFSLVQLAT PNEMRGRVGA VNFLFINASN
QLGQFESGVT AALFGAMPAA VLGGLGTIAI ALLWMKLFPT LRKVERLE