| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5253 |
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| Symbol | |
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| ID | 5154631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5476598 |
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| End bp | 5478211 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560022 |
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| Product | putative ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001241146 |
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| Protein GI | 148256561 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0401744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTC ATCCGCGCCG GGCTCATTCC GTGCTCGCAT CCTGGCTTGT TGCGTCCGCT
GTTTTGCTAT CGCCCTGTCT TGCGCCGCAG GCGCTCGCCG CTGGCAAGAC AACCATCGCC
GCCGTGATGC ATTCCGACCT GCGGGTGATC GATCCCGGCT TCACCACCGC CTATATCACC
CGCGATCATG GCTACATGGT CTATGACACG CTGCTCGCCA CCGATGCTAA CTTCAAGATC
CAGCCGCAGA TGGCGGATTG GAAGGTCTCG GACGACAAGC TGACCTACAC CTTCACCTTG
CGCGATGGCT TGAAATGGCA TGACGGCACG CCGGTCACGG CGGAGGATTG CGTCGCCTCG
CTGAAGCGCT GGGGCCGCAA TGACGGCATG GGCCAGAAGC TGATGGACTT CACCGCGAGC
CTGGAAGCTC CGGACGCCAA GACCATCGTG CTGAAGCTGA AGGAGCCTTA TGGCCTGGTG
CTGGAGTCGA TCGGCAAGCC GTCGTCGCTG GTGCCGTTCA TGATGCCGAA GCGCCTCGCT
GAGACGCCGC AGGGCCAGCA GATCCCGGAG CAGATCGGCT CCGGCCCGTT CAAATTCGTC
AAGGCGGAAT TTCAGCCGGG CGTGAAGGCG GTCTACGAGA AGAACACCGA CTATGTGCCG
CGCAAGGAGC CGGCGAGCTG GACCTCCGGC GGCAAGGTGG TGAAGGTCGA TCGCGTCGAA
TGGATCACCA TGGCCGATGC GCAGACCGCG GTGAATGCGC TGCAATCGGG CGACATCGAT
TTCATGGAAG CGCCGCCCTA TGATCTGTTG CCGGTGCTGG AAGCGAACCC GGATCTGAAG
ATCGATGTTC TCAACAAGTT CGGCTTTCAG ACGCTGGGCC GGATGAACTT CCTCAATCCG
CCGTTCGACA ATGTGAAGGT GCGCCGCGCG GCGTTCCTGG CGCTGAACCA GAAGGACGTG
CTCGACGCGC TTGTCGGCAA TGCCAAATAT CAGAAGATCT GCGGCGCGGT GTTCGTCTGC
GGCACGCCGC TGGAGACCGA TGTCGGTGCG GAAACGTTGA TCAAGGGCAA CGGCATGGCC
GAGGCCAAGA AGGCACTGGC GGAATCCGGC TATGACGGCA CGCCGATCGC GATCATGGCG
CCCGGCGATG TCGGTGCACT GAAGCCGCAG CCGATCGTGG CCGCGCAGCT GCTGCGTGAG
GCCGGCTTCA AGGTCGACCT GCAGGCGACG GACTGGCAGA CCGTGGTGAC GCGCCGCGCC
AGCCAGAAGC CGGTCAAGGA CGGCGGCTGG AACATGTTCT TCACCAACTG GGTCGGTGCC
GACGTCGCCA ATCCCGTCGT CAACGTCTCT GTCGGCGGCC GGGGCACCAA GGGCGGCTGG
TTCGGCTGGG CCGAGGATGC CGAGATCGAG AAGCTGCGCG ACGCCTATGC GCGCGCGTCT
TCGCCGGACG AGCAGAAGAA GATCGCCGCC GAGATCCAGA AGCTGAACTA TGAGCGCGTG
ATCTACATCC CGCTCGGCCA GTACCTCCAG CCGAGTGTCT GGCGCAAATC CTTGACCGGC
GTGCTGGACG GTCCGGCGAC GCCGGTGTTC TGGAACATCG ACAAGAAGGA GTAG
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| Protein sequence | MSPHPRRAHS VLASWLVASA VLLSPCLAPQ ALAAGKTTIA AVMHSDLRVI DPGFTTAYIT
RDHGYMVYDT LLATDANFKI QPQMADWKVS DDKLTYTFTL RDGLKWHDGT PVTAEDCVAS
LKRWGRNDGM GQKLMDFTAS LEAPDAKTIV LKLKEPYGLV LESIGKPSSL VPFMMPKRLA
ETPQGQQIPE QIGSGPFKFV KAEFQPGVKA VYEKNTDYVP RKEPASWTSG GKVVKVDRVE
WITMADAQTA VNALQSGDID FMEAPPYDLL PVLEANPDLK IDVLNKFGFQ TLGRMNFLNP
PFDNVKVRRA AFLALNQKDV LDALVGNAKY QKICGAVFVC GTPLETDVGA ETLIKGNGMA
EAKKALAESG YDGTPIAIMA PGDVGALKPQ PIVAAQLLRE AGFKVDLQAT DWQTVVTRRA
SQKPVKDGGW NMFFTNWVGA DVANPVVNVS VGGRGTKGGW FGWAEDAEIE KLRDAYARAS
SPDEQKKIAA EIQKLNYERV IYIPLGQYLQ PSVWRKSLTG VLDGPATPVF WNIDKKE
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