Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5147 |
Symbol | pimB |
ID | 5153520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5379220 |
End bp | 5380407 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559922 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001241049 |
Protein GI | 148256464 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.249101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0151014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAG CTGTGATCGT TTCGACGGCC CGCACCCCGA TCGGGAAGGC CTATAAGGGA GCACTCAACC ACACCGGCGG CGCGACGTTG CTCGGCCACG CGATCTCGGC GGCGTTGTCC CGCTCCGGGG TCGATGGCGC CGAGGTCGAG GATGTGGTGA TGGGCTGCGC GATGCAGCAG GGGACGACGG GCTCCAACAT CGCCCGCAAG GCGCTGCTGC GGGCTGGCCT GCCGGTGAGC GTCGCCGCGA CGACGATCGA TCGCCAATGC GCCTCCGGCC TGCAGGCGAT CGCGCTGGCG GCGCGTTCGG TCCTGTTCGA CGGCGTCACG GTGGCGATCG CCGGCGGCGG TGAATCGATC AGCCTGGTTC AGAACGACAA GATGAACGCG TTCCATGCTG TCGATCCGGA GCTTCACGCG ATGAAGGCGG ACGCCTATAT CGCCATGCTG GACACCGCGG AGGTGGTCGC CGAGCGCTAT GGTATCTCGC GGGAGCGGCA GGATGAATAC AGCCTCGAGA GCCAGCGGCG CACCGCGGCG GCGCAGCAGG CCGGTCGCTT CAATGACGAA CTTGCGCCGA TCAGCACCAC CATGGCGGTC GCCGACAAGG CGACCGGCAC CATCTCCTAT CAGCCGGTGA CGCTGTCGAC CGATGAGGGG CCGCGTCCGG ACACGACGGC TGCGGGGCTC GCCGGGCTCA AGCCGGCCAA GGGACCCGGC TTCACCGTGT CCGCCGGCAA CGCCAGCCAA TTGTCCGACG GCGCCAGCGC GGCCGTGATC ATGAGCGACA CGCTGGCCGC GCAAAAGGGC CTGAAGCCGC TCGGCATCTT CCGCGGCTTC GTCTCGGCGG GCTGCGAGCC GAACGAGATG GGAATCGGCC CGGTCCTCGC CGTACCGCGG CTGCTGGCGC GCCACGGGCT GAAGGTCGAC GACATCGATC TGTGGGAGCT CAACGAAGCC TTTGCGGTGC AGGTGGTGTA TTGTCGGGAC AAGCTCGGCA TCGACCCGGA GAGGCTGAAC GTGAATGGCG GCTCGATCGC GCTCGGCCAT CCCTACGGCA TGACCGGCGC GCGGCTCGTG GGCCACGCGC TGATCGAGGG ACGGCGGCGC AAGGCGAAAT ACGCCGTCGT GACGATGTGC GTCGGCGGCG GCATGGGGGC CGCGGGTCTG CTCGAAATCG TGCACTAA
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Protein sequence | MTEAVIVSTA RTPIGKAYKG ALNHTGGATL LGHAISAALS RSGVDGAEVE DVVMGCAMQQ GTTGSNIARK ALLRAGLPVS VAATTIDRQC ASGLQAIALA ARSVLFDGVT VAIAGGGESI SLVQNDKMNA FHAVDPELHA MKADAYIAML DTAEVVAERY GISRERQDEY SLESQRRTAA AQQAGRFNDE LAPISTTMAV ADKATGTISY QPVTLSTDEG PRPDTTAAGL AGLKPAKGPG FTVSAGNASQ LSDGASAAVI MSDTLAAQKG LKPLGIFRGF VSAGCEPNEM GIGPVLAVPR LLARHGLKVD DIDLWELNEA FAVQVVYCRD KLGIDPERLN VNGGSIALGH PYGMTGARLV GHALIEGRRR KAKYAVVTMC VGGGMGAAGL LEIVH
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