| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4592 |
|---|
| Symbol | rplM |
|---|
| ID | 5149158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4813538 |
|---|
| End bp | 4814002 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640559393 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_001240527 |
|---|
| Protein GI | 148255942 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TTTCGGCAAA GCCGGCCGAG GTCCAGAAGA AGTGGGTCGT GATCGACGCC
AAGGGTCTGG TCGTCGGCCG TCTCGCCACG CTGGTCGCCA TGCGCCTGCG CGGCAAGCAC
CTCCCGATCT ACACCCCGCA TGTCGATTGC GGCGACAACG TCATCATCGT CAACGCCAAG
CATGCCGTGT TCACCGGCCG CAAGCGCGAG CAGAAGACGT ACTACAAGCA CACCGGCTTC
GTCGGTCACG TCAAGGAGCG CACCGCGCGC CAGATCCTCG AGGGCCGCTT CCCGGAGCGC
GTGCTCGAGA AGGCCGTCGA GCGCATGATC CCGCGTGGCC CGCTCGGCCG CGTGCAGATG
GGCAATCTGC GTGTCTATGG CGGACCTGAT CATCCGCACG AGGCGCAGAA CCCCGAGAAG
ATCGACATCG CGAAGTTGAA CCGCAAGAAC ACGAGGGCCG CATAA
|
|---|
| Protein sequence | MKTFSAKPAE VQKKWVVIDA KGLVVGRLAT LVAMRLRGKH LPIYTPHVDC GDNVIIVNAK
HAVFTGRKRE QKTYYKHTGF VGHVKERTAR QILEGRFPER VLEKAVERMI PRGPLGRVQM
GNLRVYGGPD HPHEAQNPEK IDIAKLNRKN TRAA
|
|---|
| |