| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4529 |
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| Symbol | lolD |
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| ID | 5149988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4746826 |
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| End bp | 4747527 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559329 |
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| Product | lipoprotein-releasing system ATP-binding protein lolD |
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| Protein accession | YP_001240466 |
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| Protein GI | 148255881 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.830407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC AGGGGGCGGA GGATGTACCT GTTGTTTATC TCCATGAGAT CAAGCGACAG
TACATGCAGG GCGAGCGGCA GCTGACCATT CTGGACGGCG CCAAGCTCGC TTTATGGGCT
GGGCAGTCGG TCGCGCTGGT GGCCCCGTCA GGGTCGGGTA AATCGACGCT GCTGCATATC
GCGGGACTGC TCGAAAGCCC CGACGAGGGC GAGGTGTATG TCGCGGGAGT GCCGACCTCG
CAGCTCACCG ATATCGAGCG CACCCAGATG CGCCGCACCG ACATCGGTTT CGTCTACCAG
TCGCACCGGC TGTTGCCGGA GTTCACGGCG CTGGAGAATG TGATGCTGCC GCAGATGATC
CGCGGTCTGA AGCGCTCCGA GACGGTGAAG CGGGCGACCG AGATCCTGGC CTATCTGGGC
CTCGGCGAGC GCATCAAGCA CCGTCCGGCC GAACTGTCCG GCGGCGAGCA GCAGCGCGTC
GCGATCGCGC GCGCGGTCGC CAACGCCCCG CGCGCGCTGC TGGCCGACGA GCCGACGGGC
AATCTCGACC CCGGCACGGC CGATCACGTC TTCCACGCCT TGATGCAGCT CGTGAAGGCG
ACCCGCGTCG CCATGCTGAT CGCGACCCAC AACATGGAGC TGGCCGGCCG CATGGACCGG
CGCGTCTCCA TCGTCGGCGG CAAGGTGGTC GAGCTCGACT GA
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| Protein sequence | MDEQGAEDVP VVYLHEIKRQ YMQGERQLTI LDGAKLALWA GQSVALVAPS GSGKSTLLHI
AGLLESPDEG EVYVAGVPTS QLTDIERTQM RRTDIGFVYQ SHRLLPEFTA LENVMLPQMI
RGLKRSETVK RATEILAYLG LGERIKHRPA ELSGGEQQRV AIARAVANAP RALLADEPTG
NLDPGTADHV FHALMQLVKA TRVAMLIATH NMELAGRMDR RVSIVGGKVV ELD
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