| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4452 |
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| Symbol | |
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| ID | 5155658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4661201 |
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| End bp | 4662439 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640559257 |
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| Product | putative Leu/Ile/Val/Thr/Ala-binding protein |
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| Protein accession | YP_001240394 |
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| Protein GI | 148255809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.133528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTTT CCCGCCGTCG TTTCCTGCAA CGCTCGGCCC TCGCGACCTC GACGCTGATC
GCGGCACCAG CGGTGTTCCG TTCGGGTGCG CTCGCGGCCG AGAACCCGAT CACGGTCGGC
AGCCTGCACG ACCAGTCCGG TCCGATCGGC ACCTCCGGCA CGCCGATGGT GTATGCGTTG
CAGCTGGCCG TTGACGAGAT CAATGCCGGC GGCGGTCTGC TCGGCCGGCC GCTGAAGGTC
ATCCACTACG ACACCCAGTC CAACATCCAG CTGTACTCGC AATACGCCCA GCAGCTGGCG
GTGAAGGACA AGGTCGATGT CGTGCACGGC GGCATCACCT CGGCTTCGCG CGAGGCGATC
CGGCCGACCT TCGACCGCTT CAAGGTGCTG TATTTCTACA ACACGCTGTA TGAAGGCGGC
GTCTGCGACC GCAACACCTT CTGCACCGGC ACGACGCCGG CGCAGACGGT GGAGAAGCTG
GTGCCGAGCG CGATGAAGAA GGCAGGCAAG AAGGCCTACA TCATCGCGGC CGACTACAAT
TATGGTCAGA TCACCGCGAA GTGGATGACC AAGTACTGCA AGGACAATGG CGGCGAGATC
CTCTCGACCG ACTTCTTCCC GCTCGACGTC ACCAATTTCG GCTCCACCAT CTCGAAGATC
CAGGCGGCCA AGCCCGACCT GATCCTGTCG GCGCTGGTCG GCGGCAACCA CACCGCCTTC
TACCGGCAGT GGACCGCGGC CGGCATGAAG GGGAAGATCC CGATCGCCTC GACCACCTTC
GGCCTGGTCA ACGAGCCCTC GACGCTCGAT GCCGCCGAAA GCGACGCGAT CATCGGCGCC
TACGGCTATT TCGAGGAGCT GACCACGCCG GCCTCCAAGA GCTTCGTCGA GAAGATCAAG
AAGGCGCATC CGGATTCGCC TTACATCAGC GAGCTCGCCT CGTGTACCTA TGAAGGCGTG
ATGCTGTGGG CCGAGGGCGT CAAGAAGGCG GGCAGCATCG ACCGCATGAA GGTGATCGAA
GCCCTCGAAA GCGGCCTCGT TTTCGACGGC CCGAGCGGCA AGGTCTCGCT CGACAAGCAG
ACCCATCATA CGGTCCGTAA CGCGTTCCTC GCCGAGGTCA AGGACCGCAA ATGGTCGGTG
CTGGAAACCT ACACCGACGC CAAGCCGGCG GACACCGCGA GCGTCTGCGA CCTCGTCAAG
AACCCGAACG ACGTCAAGCA GTACATCATC AATCTCTGA
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| Protein sequence | MTLSRRRFLQ RSALATSTLI AAPAVFRSGA LAAENPITVG SLHDQSGPIG TSGTPMVYAL
QLAVDEINAG GGLLGRPLKV IHYDTQSNIQ LYSQYAQQLA VKDKVDVVHG GITSASREAI
RPTFDRFKVL YFYNTLYEGG VCDRNTFCTG TTPAQTVEKL VPSAMKKAGK KAYIIAADYN
YGQITAKWMT KYCKDNGGEI LSTDFFPLDV TNFGSTISKI QAAKPDLILS ALVGGNHTAF
YRQWTAAGMK GKIPIASTTF GLVNEPSTLD AAESDAIIGA YGYFEELTTP ASKSFVEKIK
KAHPDSPYIS ELASCTYEGV MLWAEGVKKA GSIDRMKVIE ALESGLVFDG PSGKVSLDKQ
THHTVRNAFL AEVKDRKWSV LETYTDAKPA DTASVCDLVK NPNDVKQYII NL
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