| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4449 |
|---|
| Symbol | |
|---|
| ID | 5155655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4658484 |
|---|
| End bp | 4659212 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559254 |
|---|
| Product | putative branched-chain amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001240391 |
|---|
| Protein GI | 148255806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.112692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC TCGTCCCTCT GCTCAAGGCC GAGCACCTGA CCATGCGCTT CGGCGGCGTC
GTCGCCAATG ACGACATCAC CTTCACTTTG CAGGAGATGG AGCTGCGCTG CCTGATCGGT
CCGAACGGTG CCGGCAAGAG CACCTTCTTC AAGACCCTCA CCGGGCAACT GGTGCCGACC
TCGGGCACGA TCGCCTTCCG CGGCATGCCG ATTGCCGGCA AGGCCTCGCA TGAGATCGCG
CGCATGGGTA TCGGCATCAA GACCCAGGTG CCGAACGTGT TCAATGGCCT GTCGGTGCGC
GAGAACATCT GGATGGCGGT GCGCCGCAAG GCGACGCCGC GGCAGCAGGG CCCGGCGGTC
GATGCGGTGC TGCAGATGAT CCGGCTGACC GACTACGCCG ACAGCATCGT CGCCACCTTG
TCGCACGGTC AGCGGCAATG GGTCGAGATC GGCATGGTGC TGGCCGCCGA GCCGGAGTTG
ATCCTGCTCG ACGAGCCCGC CGCGGGCATG ACCGACGAGG AGACCTTCCA CACCGCCGCG
ATCATCCGCG AGATCAACCA GACCCGCGCC ATCGTCGTCG TCGAGCACGA CATGGAGTTC
ATCAAGCAGA TCGCCAAGCG CGTTACCGTG TTCCACCAGG GCCGTGTGCT GGTCGAGGAC
ACCGTCGACA AGGTGCTCGC CGACAGCCGC GTGCGCGACG TCTATCTCGG CAAGAAGGTG
GCAGCATGA
|
|---|
| Protein sequence | MADLVPLLKA EHLTMRFGGV VANDDITFTL QEMELRCLIG PNGAGKSTFF KTLTGQLVPT
SGTIAFRGMP IAGKASHEIA RMGIGIKTQV PNVFNGLSVR ENIWMAVRRK ATPRQQGPAV
DAVLQMIRLT DYADSIVATL SHGQRQWVEI GMVLAAEPEL ILLDEPAAGM TDEETFHTAA
IIREINQTRA IVVVEHDMEF IKQIAKRVTV FHQGRVLVED TVDKVLADSR VRDVYLGKKV
AA
|
|---|
| |