Gene BBta_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4387 
Symbol 
ID5152602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4603102 
End bp4603872 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID640559196 
Producthypothetical protein 
Protein accessionYP_001240333 
Protein GI148255748 
COG category[R] General function prediction only 
COG ID[COG3910] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0842496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0719628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGGA AGCAACGCGA GATCCGGCTG CGCGCGCCCT ATCTGAAGCG GCTGTGGCTC 
GATCCGGCGA AGATCGCGGA CCGCAGCGAA TATCCGTTCT GCCTGCCGTT CCTGCAGGAC
GCGTTCGAGC TGAGCTTCAC GAGCGCCATC ACCATGATCG TCGGGGAGAA CGGCACCGGC
AAGTCGACTT TGCTCGAAGG GATCGCGGCG CTGGCCGGCT ATGACGAAGC CGGCGGTGGC
AAGGGCTACA TGCCTGTCAA TCATGCGCGT GCCGTGGAGC GGATGGGCGG CGCGCTCGGC
GCGGCATTCC GCGCAAGCTG GCTGCCGAAG ATCACCAAGG GCTGGTTCTT CCGTGCCGAG
AGCTTCTTTT CGGTCGCGCG CTATCTCGAT GAAGCCGCCT TGGACGATCC GTTCGGCGGT
CCGCCGCCCG ACTTCCTGTC GCATTCCCAT GGCGAGGGTT TCCTGCGCTT CTTCGAGGAG
CGCTGCCGGC GCCAGGGCCT CTACATCTTC GACGAGCCGG AATCGGCGCT GTCGCCGGCG
CGGCAGATCG AGTTTCTCAA GCTGATGCGG CGCATGGACG AGGCCGGCCA TTGCCAGGTG
CTGATGGCGA CGCATTCGCC GGTGCTGATG GCCTATCCCG GCGCAACCCT GCTGCGGTTG
ACCAAGTCCG GGTTGGAGCC CGTGCGGGTG CAGGACACCG ATCATTTCAA GGCCCTGCGC
GAGTTTTGCG CCGACCCGGA CGGCTTCGTG CACGCGGTGC TCTCTGAGTG A
 
Protein sequence
MARKQREIRL RAPYLKRLWL DPAKIADRSE YPFCLPFLQD AFELSFTSAI TMIVGENGTG 
KSTLLEGIAA LAGYDEAGGG KGYMPVNHAR AVERMGGALG AAFRASWLPK ITKGWFFRAE
SFFSVARYLD EAALDDPFGG PPPDFLSHSH GEGFLRFFEE RCRRQGLYIF DEPESALSPA
RQIEFLKLMR RMDEAGHCQV LMATHSPVLM AYPGATLLRL TKSGLEPVRV QDTDHFKALR
EFCADPDGFV HAVLSE