Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4186 |
Symbol | |
ID | 5152398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4394819 |
End bp | 4397101 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559014 |
Product | hypothetical protein |
Protein accession | YP_001240151 |
Protein GI | 148255566 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.394785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA TTGCCTCACC GATCGTGATC AGTGCGCCGG TTGGCTCTGT GATCAACATG GCGGACTACA TCTCGCAGCT GTTCTCGGGT GCGAGCTACG CCGGATATTA TTTCTACGAC GGCTCGATCG ACGAAAGCCA GTTCGGCTAT TGGGGCAGCG CCCGGATCAA CAGCCGCTTC GCCTATAACG GCACGGCCGA GCCGGTCGAC ACCGCCTTCT ACGTCCCTGC GGCGCAGCTC AACAACCTGC AGCTCGTCGT CGGCAACGAG ATCGAGCCCA GCATCTACTG CTACGCGGCG TTCGGCCCGG GCTACGGCTC GTACATGAAG ATCAGCATCG TGCCGACGCT GTACAACGAC CCGACGCCGA ACGCGATCAC CGGCGACGAC GTCGTCGCCG CCGCCAGGAC CTATCTGCAG CTCTACCAGG GCTCCGCCAG CCCCAATGGC TGCCACTCGA TCGCGTCGGA CTACGCTGCG GCCGCCGGCG CGCCGCTGCC GGCGATGTCG GGGTCGCTGA CCCCGTCGCA GAATCTCGAT GGCGGGCTGT GGAGCGCGAT CTTCAAGGGC GACGTCACCC CCGACCCGAA CTGGCAGAAC CGCCTGCAGC CGGGCGACAT CGTCCGCTTC GACTATGCCG ATCCGAGCAA GTCGCAGCAC ACCTTCACGG TGATGAGCGT GGCCAATGGC AAGGTCGATA CGATCGACAA TTGGAACGCC GCGCTCGGCG AGCACCAGAC CGATTTCAGC CAGCTCGCCA ATGCCTCAAC GGTCACGATC TACCGCATCA CCGACCAGTA TTATCACCTC TCGGGAACGG TGAATGACGA CCTCCTGATC GGCAGCGTCA AGAACGATGC CATCGATGGC GGCGCCGGCA ATGACACCAT CTATGGCGGC GTCGGCAACG ACATTCTCAA CGGCCAGGCC GGCAACGACA TCCTCCGCGG CGGCGAAGGC GGCGACGTCA TCAATGGCGG CGACGGCATC GACACCCTGT TCGGCAATCA AGGCGGCGAC CGCTTCGTGT TCGACCAGGC GATCCTGGCA TCCAACACCG GCGTCAATTC CGACCTGATC CAGGATTTCA ACCGCGGCAA TGCCGGCGTC TACAGTGCCG CCGAGGGCGA CACGATGGAC CTGAGCGCCC TGCTCTCCTG GGGCGTCCAT GCCGGCCAGA CCGCCGATCA TCTCGTTCGC GTCGTCGAGG ACCAGAGCGG CGCCTTCGCC GACGTCCAGA TGGACAGCGA CGGCCTGAAT GGCGGCGTGC ACTGGACCAC CATCGCCCAT GTCGCCGGCA CACACCAATC CGAGACATTC CGCTTCCTGC TCGACGCCGG CGTGAGCGCC AGCACCGGCG TCCAGGGCGA TTATGGCCTG ACCGGCGATT TCGACGGCGA CGGCAAGGCC GATATCCTCT GGCGCAACGA CAGCGGCACC CTGGCGCAAT GGCAAATGAA CGCCGCCCAG GTGATGGCCG GCCCGCAGCT CGGCTCCGTC CCGGACAACA GCTGGCACGT CGTCGGCGTC GCCGACTTCA ATGGCGACGG CAAGAGCGAC CTGTTGTGGC GCAACGACAG CGGCGCGCTC GCCGAATGGA TGATGAACGG ATCGCAGATC GTCTCCGGAC CAGGCATCGC CTCCTCGCCC GACAAGAGCT GGAACGTCGC CGGCACCGCT GATTTCGACG GCGACGGCAA GGCCGACATC CTCTGGCGCA ACGACAGCGG CGGGCTGGCG CTGTGGACGA TGAACGGCGC GCAGGTGCTG TCCGGGCCGA ACATCGGCTC GTCACCCGAT CCGAGCTGGC ACATCGTCGG CGTCGATGAT TTCGGCGGCG ACGGCAAGGC CGATATTCTC TGGCGCAACG ACAATGGCAC GCTCGCGGAA TGGTCGATGA ACGGATCGCA GATCCTGGCC GGGCCTGCGA TCGGCTCGGT GCCCGACCTG TCCTGGCACG TCGTCGCCAC CGGCGATTTC AACGGCGACG GCAAGGCTGA CATTCTCTGG CGCAATGACA GCGGCACGCT GGCCGAATGG CAAATGAACA ATGGCCAGAT CCTGGCCGGC CCGCAGATCG CCTCCACCCC CGACCTGTCC TGGCATGTCA TCGGCACCGG CGATTTCAAC GGCGACCACA AGACCGACAT TCTCTGGCGC AACGACAGCG GCACCTTGGC GGAATGGACC ATGGACGGCG CCCAGGTGCT GGCCGGCCCG CAGATCGGCT CGATCCCTGA CGCCACATGG AAGACGGTCG CCCACCATTA TGATTTCGTC TGA
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Protein sequence | MADIASPIVI SAPVGSVINM ADYISQLFSG ASYAGYYFYD GSIDESQFGY WGSARINSRF AYNGTAEPVD TAFYVPAAQL NNLQLVVGNE IEPSIYCYAA FGPGYGSYMK ISIVPTLYND PTPNAITGDD VVAAARTYLQ LYQGSASPNG CHSIASDYAA AAGAPLPAMS GSLTPSQNLD GGLWSAIFKG DVTPDPNWQN RLQPGDIVRF DYADPSKSQH TFTVMSVANG KVDTIDNWNA ALGEHQTDFS QLANASTVTI YRITDQYYHL SGTVNDDLLI GSVKNDAIDG GAGNDTIYGG VGNDILNGQA GNDILRGGEG GDVINGGDGI DTLFGNQGGD RFVFDQAILA SNTGVNSDLI QDFNRGNAGV YSAAEGDTMD LSALLSWGVH AGQTADHLVR VVEDQSGAFA DVQMDSDGLN GGVHWTTIAH VAGTHQSETF RFLLDAGVSA STGVQGDYGL TGDFDGDGKA DILWRNDSGT LAQWQMNAAQ VMAGPQLGSV PDNSWHVVGV ADFNGDGKSD LLWRNDSGAL AEWMMNGSQI VSGPGIASSP DKSWNVAGTA DFDGDGKADI LWRNDSGGLA LWTMNGAQVL SGPNIGSSPD PSWHIVGVDD FGGDGKADIL WRNDNGTLAE WSMNGSQILA GPAIGSVPDL SWHVVATGDF NGDGKADILW RNDSGTLAEW QMNNGQILAG PQIASTPDLS WHVIGTGDFN GDHKTDILWR NDSGTLAEWT MDGAQVLAGP QIGSIPDATW KTVAHHYDFV
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