| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4108 |
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| Symbol | |
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| ID | 5154842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4312798 |
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| End bp | 4313973 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558942 |
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| Product | putative secretion protein (HlyD) |
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| Protein accession | YP_001240080 |
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| Protein GI | 148255495 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.331978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.146318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCG CGAGGCGCCA GCAGGTCGAA GCGGCCGCAA CGCAGATCTC CGATCCGCGA
CGGGACGCAG GCGAACGTTC GGGTGCGGCA CCGATCGCGA CGACGCTTGC CCGCGCCGAA
CGGCAGTCGA TCACCGAGAC GCTGGCCGTG ACCGGATCGC TTGTGGCCCG CGAGGAAAAT
GTTGTCGGTG CGGAGGTCGA CGGGTTGCGC ATCGTCGAAC TGCTGGCCGA CGTTGGCGAT
CGCGTGGAAG CAGGGCAGGT GCTCGCTCGC CTCGACGGCA CGATGCTCCG GACACAGCTC
GCGCAGAACA CCGCGATGAT CGCGATAGCC CAAGCGTCGG TCGCGCAGAT GCAGGCCTCG
ATGGCGGAGA TGCAAGCCAA CGAAGCCGAA GCGGCCGACG CGTTGAATCG CACGCTGACC
TTAAACTCCA CCGGCACGAT ATCTCCAGCG CAACTCCTGG CGCGTGAGAC CCAGGCCAAG
GTCGCCGCGG CAAAGTCCAC CGCAGCTGCG GAGAATTTGC GCATGGCCAA GGCCGAGGAA
GCGTTTGCGG AGGCGCAACG TGGTGAGATC GAGCTGAAAA TCGCGCGGAC CGAACTGAAG
GCGCCGACTG CGGGGATCAT CTCGCACCGC GCCGCTCGCC TCGGCGCGGT GACCGGCACG
GCGGGCGAAC CTCTGTTCCG CCTCATACGT AACGGTCAGA TCGAATTCGA TGCCGAGGTT
CCGGAAACCG TGCTGCCGCA GATCGAGCCG GCCCAGGACG TGGAAGTTTG GTTGCCCGGC
GTCAGCCAGT CCATCCGCGG CCGCGTGCGG CTGGTCGATC CCACTGTCGA CAAAGCGAGC
CGTCTCGGTC GCGTCGCGGT CGCGCTCTCT CCCCATGCGG CCATGAGGGC CGGTGTTTTT
GCCCGCGGCA GCATTACACT CGGCAAGCGA CAAGCCGTCA CCGTACCGCT GTCCGCCGTC
AGCTTCAGCA AGAATGGCAG CTATGTTCAG CTCGCGACCA ACAATGTCGT CGAACTCCGG
AATGTCCAAA CCGGACTTGC ACGCGGCACC CGTGTCGAAA TCGTAAGCGG GCTGATTGAA
GGCCAGGAGG TCGTCGTTCG AGCCGCCGCT TTCGTCAGGC CGGGCGACCG GATCTTGCCG
GTCCGCAGTG ATGCCGGATC TGCGGGAGAA GACTGA
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| Protein sequence | MSGARRQQVE AAATQISDPR RDAGERSGAA PIATTLARAE RQSITETLAV TGSLVAREEN
VVGAEVDGLR IVELLADVGD RVEAGQVLAR LDGTMLRTQL AQNTAMIAIA QASVAQMQAS
MAEMQANEAE AADALNRTLT LNSTGTISPA QLLARETQAK VAAAKSTAAA ENLRMAKAEE
AFAEAQRGEI ELKIARTELK APTAGIISHR AARLGAVTGT AGEPLFRLIR NGQIEFDAEV
PETVLPQIEP AQDVEVWLPG VSQSIRGRVR LVDPTVDKAS RLGRVAVALS PHAAMRAGVF
ARGSITLGKR QAVTVPLSAV SFSKNGSYVQ LATNNVVELR NVQTGLARGT RVEIVSGLIE
GQEVVVRAAA FVRPGDRILP VRSDAGSAGE D
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