Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4078 |
Symbol | |
ID | 5150380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4277186 |
End bp | 4278088 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558911 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001240050 |
Protein GI | 148255465 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.2043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.325565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCGA GCCTGCGGCA ATTGGAGGCG CTGGTCCTGG TGTATCGGCT CGGCAGCATC ACCAAGGCCG CCGCCGAAAT GCGCGTCACG CAATCGGCCA TCAGCCTGCT GATCCGGCAG ATCGAGGAGA ATTTTCAGCT CAAGCTGTTC GACCGGACGA CGCGCGCCCT GCATCCGACG GCAGCGTGCC GGGAAGCGAT CATGGCTGCC GAGCGCATCC TGGCGGGGGC GCAGGGATTG TCGCGCAGGA TGCGCGATCT TGCCGAGATC AAGGCCGGGC GGATTTCCAT CGCCGTATCA GCCGGCGTCG CTTCGGCGCT GCTGCCCCGG GTGTTTTCGA CGTTTCGCTC GCGCCATCCG GAGGTCAGCA TCGATCTGCT CGACGTCGCG CCCGACGAAC TGCTCGCTGT CGTGATGGAT GGGCGTGCCG AATTCGGCCT CGGCAGCGTC GAGGACGAGG GGGTGCCGGA GGCGCGTGTC GAAACGCTGA TGCGAAGTCC GCTGTCGGCC ATCGGGATCA AGGATGGCGA GTTCGAACAG CAACGTCGTC TGACATGGGA CGGCATCATG AGCGCGGACG TGATCATGAT GCGCCATGGC ACGCGAATCC GCCGTCAGAT CGACGAGGCG CTGGCACAGA CCGGGCGAGC GCTGAAGCCT GCGTGGGAAG TGTCGCTGAT CACGACCGCG CTGGCGCTCA CTGCCGAAGG GGCTGGCATC AGCATCCTGC CCGGGCACAT GCTGCCGAAG GCACAATTCC CGACGCTGGC CGCCGTCCCC CTGTCGCAGC CGACGATCTA TCGACACGTC TCCTTGCTGA GCCGCGCCGA CTTTGGATTG TCGCCGGCCG CACAGCGCTT TGTGGAGATC GCAAAAGACC TCCTCTCGAA CAAGGCTGGC TGA
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Protein sequence | MPPSLRQLEA LVLVYRLGSI TKAAAEMRVT QSAISLLIRQ IEENFQLKLF DRTTRALHPT AACREAIMAA ERILAGAQGL SRRMRDLAEI KAGRISIAVS AGVASALLPR VFSTFRSRHP EVSIDLLDVA PDELLAVVMD GRAEFGLGSV EDEGVPEARV ETLMRSPLSA IGIKDGEFEQ QRRLTWDGIM SADVIMMRHG TRIRRQIDEA LAQTGRALKP AWEVSLITTA LALTAEGAGI SILPGHMLPK AQFPTLAAVP LSQPTIYRHV SLLSRADFGL SPAAQRFVEI AKDLLSNKAG
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