Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4006 |
Symbol | |
ID | 5150448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4213254 |
End bp | 4214474 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640558838 |
Product | putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide |
Protein accession | YP_001239979 |
Protein GI | 148255394 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.883363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CCGATTCCCC GACCCGCCGC ACCCTGCTCC GTTCCGGCCT TGGTGCCGCC GCGCTGCTCG TTCCTGCCCT GCCTGCAGCC GCCGCGCCGG CCGAATTCGA CGCCTGGCGC GACGGCTTCC GCGGCCGCGC GCTTGCCAAG GGCATCTCGC AGGCGACCTG GACGCGCGTG ATGGCACGGC TCGAGCCGGA CATGACCGTG TTCAAGGAGA TGCGCAATCA GCCCGAGTTC AAGGAGCAGC TCTGGCAATA CATCAACCGC CGCGTCTCCG ACTGGCGCGT CATCAACGGC AAGGCGGCGC TAGCGAAGAA CGAGGCGCTG TTCGCGCGCA TCGAGAAGGA TTTCGGCGTC GAGCGCGGCA CCTTGCTGGC GCTGTGGGGC GTCGAGTCCG CGTTCGGCGA TCCGCTGGTG CAGCAGAACC ACATGCGGCC GGTGTTTCCC GCGCTCGCCG CGCTCGCCTG GAACGAGCCG CGCCGCAAGG CCTATTGGGA GACCGAGCTC ACCAACGCGC TGAAAATCGT CGACCGCGGC TGGAGCACGC CGGAGGAGAT GCGCGGCTCC TGGGCCGGCG CGATGGGCCA CACACAATGG ATGCCCGAGG TCTGGCTGAA CGTCGGCTTC GACTATGACG GCGACGGCAA GATCTCGCCG TTCGGCCGTC CCGACGACGC GCTCGGTTCG ACCGCGCGCT ATCTCGTCAA TCGCGGCAAA TATCATCGCG GCGAGCACTG GGGCTACGAG GTGCGGGCAC CCGGCAACAT GTCGGGCAGC AGGACCTATG CGGCATGGCA GGCCGCCGGC GTCACCCGCG CCGACGGCCA GCCCTTCCCG CAGCCGAACG CGACCGCGCA GCTGTGGATC CCCGTCGAGG GCGGCCCCGC CTTCCTGCTC GGACCGAACT TCTACTCGGT GAAGTCCTAC AATCCGGCGA TGAGCTACGC GCTCGCGATT TGCCATCTCG GCGACCGCAT CCTGGGGGCG CCGCCCTTCC TGCAGCCCTT CCCCGGCTCC GAGCGCGCGC TGACCTTGGC CGAGGTCCAG GAGATGCAGA AGCGCCTGAC GGCGGCCGGC TTCGACACCG GCGGCACCGA CGGCCGCGTC GGCAACGACA CCATGAAGGC GATCCGCGAC TTCCAGGCCA AGGCCGGCCT CACACCCGCC GACGGCTATG GCGGGCTGAA GGTGCTGGCG AAGCTGCGAC AGGGCGGTTG A
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Protein sequence | MTQPDSPTRR TLLRSGLGAA ALLVPALPAA AAPAEFDAWR DGFRGRALAK GISQATWTRV MARLEPDMTV FKEMRNQPEF KEQLWQYINR RVSDWRVING KAALAKNEAL FARIEKDFGV ERGTLLALWG VESAFGDPLV QQNHMRPVFP ALAALAWNEP RRKAYWETEL TNALKIVDRG WSTPEEMRGS WAGAMGHTQW MPEVWLNVGF DYDGDGKISP FGRPDDALGS TARYLVNRGK YHRGEHWGYE VRAPGNMSGS RTYAAWQAAG VTRADGQPFP QPNATAQLWI PVEGGPAFLL GPNFYSVKSY NPAMSYALAI CHLGDRILGA PPFLQPFPGS ERALTLAEVQ EMQKRLTAAG FDTGGTDGRV GNDTMKAIRD FQAKAGLTPA DGYGGLKVLA KLRQGG
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