Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3988 |
Symbol | |
ID | 5152208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4196061 |
End bp | 4197158 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558822 |
Product | putative dehydrogenase/oxidoreductase |
Protein accession | YP_001239963 |
Protein GI | 148255378 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA TAGGCATCGG CATCATCGGA TGCGGCAACA TCAGCACCGC CTATCTGAAG GCGGCACAAC GCTTTCCCGT GCTCGACATC AAAGCACTAG CCGATATGCG CAGCGACGCG GCCGAGCGTC AGGGCTCAGC CTTTGGTCTA CCGGCCATGC GCGTCGACCA ACTGCTCAAG CGCGATGACA TCGAGATCGT GATCAACCTC ACCGTGCCGC TGGCCCACAC CGACGTCAGC CTCGCGGTGC TGAATGCCGG CAAGCATGTC CACTCCGAGA AGCCGCTCGG GATCGATGTC GCGGAAGCGC GCAAGGTGAT CGAACTCGCC GCGCAGAAGA ACCTTCGGGT CGGCTGCGCG CCGGATACGT TTCTCGGCGG CGGGCACCAG ACCGCGCGCA AGCTGATTGA CGACGGCGCG ATCGGTGCGC CTGTCGCGGG CAGCGCCTTT TTCGGGTGCC CCGGCCATGA ACGCTGGCAC CCGGCTCCGG GCTTCTATTA TCTCCGCGGC GGCGGCCCGA TGCTCGATAT GGGTCCTTAC TACATCACGG ATCTCGTGCA ATTGCTCGGC CCCGTCGCCA GCGTGATGGG CTCGACCGCA CGCCCACGCT CCGAACGCCT CGTCACCAGC CAGCCGATGA ACGGAACGCT GATCCCGGTC GAGGTGGCCA CGCATGTCGC GGGCACGCTC GAATTCGAGA GTGGGGCGGT CGTGTCGGTC ACGATGAGCT TCGACGTGCC GAAGCACCGG CACGCGCCGA TCGAGATCTA TGGCAACAAG GGCAGCATGC TGATGCCGGA TCCGAACCGT TTCGGCGGCG AGGTGCAGGT CGCCAAGACC GGCGGTGAAT GGGAGACGAT GTCGCTGACG CACGGTCACG TCGATGGCGA ATTCCGCTCC ATCGGCGTCG CCGACATGGC CACGGCCATC CTGAACGACC GCCCGCATCG GGCCAGCGGC GCGCTGGCCT TTCACGTGCT GGAAGTGATG GAGGCGTTCC AGACCTCCGC CAATGAGGGC CGGCGCGTCG TGATCGAGAG CCGCGTGGAG CGGCCGGCGA TGCTTCCTGC GGGGCAAGAT ACCGGACAGA TCGATTGA
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Protein sequence | MRKIGIGIIG CGNISTAYLK AAQRFPVLDI KALADMRSDA AERQGSAFGL PAMRVDQLLK RDDIEIVINL TVPLAHTDVS LAVLNAGKHV HSEKPLGIDV AEARKVIELA AQKNLRVGCA PDTFLGGGHQ TARKLIDDGA IGAPVAGSAF FGCPGHERWH PAPGFYYLRG GGPMLDMGPY YITDLVQLLG PVASVMGSTA RPRSERLVTS QPMNGTLIPV EVATHVAGTL EFESGAVVSV TMSFDVPKHR HAPIEIYGNK GSMLMPDPNR FGGEVQVAKT GGEWETMSLT HGHVDGEFRS IGVADMATAI LNDRPHRASG ALAFHVLEVM EAFQTSANEG RRVVIESRVE RPAMLPAGQD TGQID
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