| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3958 |
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| Symbol | |
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| ID | 5151812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4162304 |
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| End bp | 4165027 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640558793 |
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| Product | putative outer membrane autotransporter barrel precursor |
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| Protein accession | YP_001239934 |
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| Protein GI | 148255349 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACACT CGCTTGTCCT GGTCGGACTG CGTGCCGGCG TTTTTGCGCT GCTGGGTCTG
ATCGTCGCGC CGGATTCAGC CCGGGCCGGC TGCTCAATCG GCGGAACGGT TCAAACCTGC
ACTGGAGATG TGTCGGCGGG TGTTGCGGTC GATCCCTCCG CGGCCACGCT GCTGGTCAAT
TCACTGACCA CCAGCATCAC GCCGACCTCA GGGACTGCCG GCGTTTCGGC CGGGCAATTC
ACCTCCGATA TTTCCAGCAC GATCGATCTC GGGCCGTTTC AAATCATCAC CTCCGGGGCT
GGAGGGGTGA GGTTCATCAG TGCGCGAAAC GTAGATCTCA CATTCAAAGG GGCGATCTCC
ACCAATGGGG GTGCGGGGAT CGTTGCGTAC AGCGGTGGTG AGCCGAGCTT CGATGTCCGT
GTCAGCTCGA CGGGAAACAT CTCGACCCGC GGGGCCGGCG CGGCCGGTAT CACCGCCGGC
ACGAGTTGCT GCGGGGGCGT GACTCTTGAC TCGACGGGAG ACATCTCGAC GAATGGGAAC
AGCTCCAACG GTCTTGTCGC GCAGGCGGGC GCCTTCTCGA GCGCGGTGAC GTCGAAGGGA
AACGTGACGA CCGCAGGCGA CAGCTCGGCC GCCATTGCGG CATTCAGCAG CGGCTCCCTG
GCGAGGATCT CGTCGCAAGG CAACCTGGCG ACATCGGGAA GCAGCGCTCC AGGAATCACT
GCGTCCGGCA GGGACATCGC CATCAATTCG ATCGGCAATA TCGTCACGAG CGGAAGCGGG
TCTGATGGCA TCCTCGCGCG ATCCACATCC TTTGGCCAAC TCAGCTCCAT CAGCTCGAAC
GGCAACATCA CCGCGTCCGG CGACGGCTCC TACGCAATCC ATGCCATCAC GTCCAGTATA
GGCAACACCA CCGTGACCAA CCTGGGAGGT ACGATCTCCG GAGGGCCGGG AGCGGGCGCC
GGCATCTACC TGCAGGGAGG CAACGCCAAC GTCCTGACGA ATTATGGCAC GGTCACCAGC
GCAGCGGGCA CCGCAGGAAG CGCGATTTTG GGCGATACCG GCAACATTGT CGTCAACAAT
TCCGGCACCA TCATTGGCAG CGTCAACCTC GGCCGCGGAA CCAACAGCTT CAACAATCTT
GCAGGGGCCG TGTTCGCGCC GGGCGCTTGG ATTGCGCTCG GGGACGGAAT GACGCTGACA
AATAGTGGAT TGCTCGCTCC CGGCGGGAGC GCCGCGATCC AGACGACCAA TCTCAGCGGC
AATTTGATCC TGAATTCGGG CGGAACCTAT CTGGTCAAGG TCTCGCCCAC CGCATCCGAT
CAGATCGTCG CGTCGGGAAC GGCGGCATTG TCGGGCACGG TGAATGCGGT CTTCAACCCC
GCCGCCTATG TGACCAAGCG ATACACGATC CTGTCCGCGG CCGGCGGCCT TAACGACACG
AGGTTCTCCA CCTTGGTAGA GACCAACCTG CCCGCGAATT TTCATGCTGC GCTGAGCTAC
ACCACCAAGG ATGTCTACCT TGATCTGATC CTCAATTACG GACTTCCCGG TGGGCTCAAG
GGCAACCAGG CCGCAGTCGG GAATACGCTG ATCAACGTGT TCACCGGCAG TGGAATTCCG
TTCGTCTATG CTGGGCTGAC GGCGAATGGG CTGACGCAGG CCTCAGGTGA GGTTGGCACG
TTGCCGCAGC ACACGACGTT CGATGCAATG GGCCAGTTCA TCGGGCTACT CACCGACCCA
CTGATACAAA GCACGGCCGC GCCTGCTTCG TGGTCCGGCC GGGCAGGGTT TGCGGGCGAG
CGCGAGGCGA ACCAGGCAAA TCGGCGGGCC GACGCGTTTG CGATGTTCAC CAAAGCCCCT
CCGCTGCCAT TCGTGCAGCA CTGGAACGTG TGGACCGCAG GCTTCGGTGG GTCGCAATCG
AGCAACGGGC AAGCGAGCGT TGGATCGAGT GACACGACCA GCCGAATCTA CGGTGCAGCT
GCGGGGGCCG ACTACCTGTT TTCGCCGAAT ACGCTGGCGG GCTTCTCGCT CGCCGGAGGT
GGCACGAATT TCAGCATCAA CGGACTCGGT TCGGGACGCT CTGATCTTTT TCAGGTCGGT
GCGTATATGC GCCACACGGA CGGACCGGCC TACGTCTCGG CAGCGGCGGC TTATGGTTGG
CAGGACATCA CGACCGATCG CTACGTGACG ATCACAGGCG TCGATCATCT CCGCGCGGCG
TTCAACGCGA ACGCCTATTC CGGCCGGGTC GAAGGTGGCT ACCGCTTTGT CGGACCTTGG
AGCGGTGGCG TCGGCATCGC GCCCTACGCA GCGGCGCAGG TCACCACGAT CGCCCTGCCG
TCCTATTCGG AGCAGGTGGT CTCCGGTGCC GGAAGCTTCG CCTTGAATTA CGCTTCGAGG
AGCCCGACCG ACACCCGCAG CGAGCTCGGC TTCCGTACTG ACAAGTCGTT TGCGGTGACA
AATGGTGTGC TCTCTCTTCG TGGCCGCCTT GCCTGGGCGC ATGACTTCAA TCCCGACCGG
GCGACTGCCG CAACATTCCA GGCGGTGCCC GGGGCGAGTT TTGTCGTCAA TGGGGCGGCG
CAAGCCAGAG ATTCGGCGCT GACCAGCGCC GCGGTCGAGA TGCATTGGAT GGCCGGCTGG
TCGGCGGCAG CGACCTTCGA AGGGGAGTTT TCGGATACGA CCCGCTCATA TGCGGGCAAA
GCCGTCGTTC GCTACGCGTG GTAG
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| Protein sequence | MKHSLVLVGL RAGVFALLGL IVAPDSARAG CSIGGTVQTC TGDVSAGVAV DPSAATLLVN
SLTTSITPTS GTAGVSAGQF TSDISSTIDL GPFQIITSGA GGVRFISARN VDLTFKGAIS
TNGGAGIVAY SGGEPSFDVR VSSTGNISTR GAGAAGITAG TSCCGGVTLD STGDISTNGN
SSNGLVAQAG AFSSAVTSKG NVTTAGDSSA AIAAFSSGSL ARISSQGNLA TSGSSAPGIT
ASGRDIAINS IGNIVTSGSG SDGILARSTS FGQLSSISSN GNITASGDGS YAIHAITSSI
GNTTVTNLGG TISGGPGAGA GIYLQGGNAN VLTNYGTVTS AAGTAGSAIL GDTGNIVVNN
SGTIIGSVNL GRGTNSFNNL AGAVFAPGAW IALGDGMTLT NSGLLAPGGS AAIQTTNLSG
NLILNSGGTY LVKVSPTASD QIVASGTAAL SGTVNAVFNP AAYVTKRYTI LSAAGGLNDT
RFSTLVETNL PANFHAALSY TTKDVYLDLI LNYGLPGGLK GNQAAVGNTL INVFTGSGIP
FVYAGLTANG LTQASGEVGT LPQHTTFDAM GQFIGLLTDP LIQSTAAPAS WSGRAGFAGE
REANQANRRA DAFAMFTKAP PLPFVQHWNV WTAGFGGSQS SNGQASVGSS DTTSRIYGAA
AGADYLFSPN TLAGFSLAGG GTNFSINGLG SGRSDLFQVG AYMRHTDGPA YVSAAAAYGW
QDITTDRYVT ITGVDHLRAA FNANAYSGRV EGGYRFVGPW SGGVGIAPYA AAQVTTIALP
SYSEQVVSGA GSFALNYASR SPTDTRSELG FRTDKSFAVT NGVLSLRGRL AWAHDFNPDR
ATAATFQAVP GASFVVNGAA QARDSALTSA AVEMHWMAGW SAAATFEGEF SDTTRSYAGK
AVVRYAW
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