Gene BBta_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3891 
Symbol 
ID5149027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4076218 
End bp4076841 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID640558725 
ProductGNAT family acetyltransferase 
Protein accessionYP_001239869 
Protein GI148255284 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.867552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAGT TAGATAGTTT TCGTCCGCGG CCGGGCTTCG GCTATGTGCG GACGCTCAGC 
CAGCACGAGG AACTGCCGCT GCTGCGCGAT CATCTGTTGC GGCTCGATCC TGAGAGCCGG
CACGATCGAT TCAACGGCTT CCTCGATGAC AGTTTCATCG AACGCTATGC GGCCCGCTGT
GCGGCTGACG GCACGATCGT TGTCGCCTAT ATGGAAAACG GCATGGTCCG CGGTGCGGCC
GAGCTGCATC CGCCGGAGCA GTCGGAAGAC GGGCTCCCGG AGATTGCGTT CAGCGTGGAA
TCCTGCGTGC GCCGTCGCGG CGTTGGCAGC CTGCTGTTTC AGCGCGTGAT CTCGGAGGCG
CGCTGGAAGG GCTACCGCCA GCTGCGGGTC ACGACCGGAG CGCAGAACCA CGCGATGCGG
GCCTTGGCGG CCAAGTTCGG CGCCCACCTG GCGTTCCGCC ATGGGGAGTC GACGGGCACG
ATCGATCTGG AGCAGCAGCC GCAGGACGAA TTGACGAAGC TCGTGATCGA GGCGCCGATC
GCAGCGGCAC GTGCCTTCTT CAACCTCAAC CGCGCCTGCT GGAAGCTGGT CACGCGCATG
TATGGCGACC AGCGCGCGGC TTGA
 
Protein sequence
MSQLDSFRPR PGFGYVRTLS QHEELPLLRD HLLRLDPESR HDRFNGFLDD SFIERYAARC 
AADGTIVVAY MENGMVRGAA ELHPPEQSED GLPEIAFSVE SCVRRRGVGS LLFQRVISEA
RWKGYRQLRV TTGAQNHAMR ALAAKFGAHL AFRHGESTGT IDLEQQPQDE LTKLVIEAPI
AAARAFFNLN RACWKLVTRM YGDQRAA