| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3627 |
|---|
| Symbol | |
|---|
| ID | 5152898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3793934 |
|---|
| End bp | 3794977 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640558473 |
|---|
| Product | putative alcohol dehydrogenase |
|---|
| Protein accession | YP_001239619 |
|---|
| Protein GI | 148255034 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.305308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCG CGGTTCTCCA TGCATTCGAT GAAAAGCTGA CGGCGAAGGA GTTCGTCAGA
TACGAAGAGG TCGCCGACCC GAAGATCTCG CGTCCGATGG ACGTGATTGT GCGCATCGGT
GGCGCCGGAG TCTGCCGTAC CGATCTTCAC ATCGTCGAGG GCATCTGGCG CAGCAAGGTC
GACGTCAAGC TTCCCTACAT CATGGGTCAT GAGAACGCAG GCTGGGTCGA AGCTGTTGGC
CCTGGCGTCG AAGGCGTCAA GGTCGGCGAC AGCGTGATCT GTCACCCGCT GGTGACCAGT
GGCCATTGCC TGGCGTGTCG GCGCGGCAAC GACATGCACG CGCTCGACAG CTCCTTTCCT
GGCATCAACG CCAATGGCGG CTACGCGCAA TATCTGCTGA CCGGACAGCG CTCGCTGATC
AAGCTGCCAA AGTCGCTGGC GCCGAAGGAC GTCGCGCCCT ACACGGACGC CGGCCTGACG
GCCTATCGCG CGGCCAAGAA GGCGTCGCGT CATCTGCTGC CGGGCGAATA CGCCGTGGTG
ATCGGGGCCG GCGGCCTCGG CCATATCGGC ATCCAGGTTC TCGCGGCGCT GTGTGCGGCG
GAGATCATCG TCGTCGACCG CTCCGACAAA TCGCTGGAGC TCGCCAAGAC CTGCGGGGCG
CACCACCTGG TGAAGGCCGA TGGCGGCGAG GTCGAGGCGG TGCTGGCGCT GACCGGCGGT
CGCGGCGCGG AGGCCGTCAT CGACTTCGTC GGCGAGGGCG ATGCCATTGC CAAGGGTCTC
GCGATGACCG CCAATGGCGG CTCCTATTAC ATCGTGGGCT ATGGCGGCAA GATCGATCTG
CCGACCATCG ACATGATCAC CACCGAGAAG ACCATCGTCG GCAATCTGGT CGGCACCTAT
GCGGAGCTGG TCGAGTTGAT GGCGTTGGCC GACCGCGGCC TCGTGAACCT GCATACCAAA
GAATACCGGC TGAGCGAGGC CAATGACGCG CTGCATGACC TGCATCATGG GCGTATCCAC
GGACGCGCCG TGCTGATCCC GTAA
|
|---|
| Protein sequence | MKAAVLHAFD EKLTAKEFVR YEEVADPKIS RPMDVIVRIG GAGVCRTDLH IVEGIWRSKV
DVKLPYIMGH ENAGWVEAVG PGVEGVKVGD SVICHPLVTS GHCLACRRGN DMHALDSSFP
GINANGGYAQ YLLTGQRSLI KLPKSLAPKD VAPYTDAGLT AYRAAKKASR HLLPGEYAVV
IGAGGLGHIG IQVLAALCAA EIIVVDRSDK SLELAKTCGA HHLVKADGGE VEAVLALTGG
RGAEAVIDFV GEGDAIAKGL AMTANGGSYY IVGYGGKIDL PTIDMITTEK TIVGNLVGTY
AELVELMALA DRGLVNLHTK EYRLSEANDA LHDLHHGRIH GRAVLIP
|
|---|
| |