Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3551 |
Symbol | ilvD1 |
ID | 5151507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3706392 |
End bp | 3708215 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558403 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001239549 |
Protein GI | 148254964 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.347944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAT CCAACGGACA TGCCGGCAAC GGCGCTGACA AGGGCCGCAA GCTGCGCTCG CAGGCCTGGT TCAACGATCC GCACAATCCG GGCATGACGG CGCTGTATCT CGAGCGCTAT CTCAATTTCG GCTTGACCCG TGCCGAGCTG CAATCGGGCA AGCCGATCAT CGGCATTGCC CAGACGGGCA ACGACCTGTC GCCCTGCAAC CGCCACCACA TCGAATTGGC GCATCGCGTG CGCGAAGGCA TCCGCGAAGC CGGCGGCATC GCGATGGAGT TTCCGACACA CCCGATCCAG GAGACCGGCA AGCGGCCGAC CGCGGCACTC GACCGCAACC TCGCTTATCT CGGACTTGTG GAAATCCTGT TCGGCTATCC GCTCGATGGC GTGGTGCTGA CCACCGGCTG CGACAAGACG ACGCCCGCCT GCCTGATGGC GGCGGCGACC GTGAACATCC CCGCGATCGT GCTGTCGGGC GGGCCGATGC TGAATGGCTG GCACGAGGGC CAGCGCACCG GCTCCGGCAC CGTGGTCTGG AAATCGCGCG AGCGGCTCGC CGCCGGCGAG ATCGACTATG AGGAGTTCAT GCAGATCGTG GCGTCGTCGG CGCCGTCGGT CGGCCACTGC AACACCATGG GCACCGCCTC GACCATGAAC GCGCTCGCCG AGGCGCTCGG CATGTCCCTG CCCGGCTGCG CCGCGATCCC CGCGCCGTAT CGCGAGCGCG GCCAGATCGC CTATGAGACG GGCAAGCGCA TCGTCGACAT GGTCTGGGAA GATCTGAAGC CGTCGGACAT CCTCACCCGC AAGGCGTTCG AGAACTGCAT CGTGGCGAAC TCCGCGATCG GTGGCTCGAC CAATGCGCCG ATCCACATCA ACGCGCTGGC GCGCCATGTC GGCGTCGAGC TCGATATCGA CGACTGGCAG AAGGTCGGCC ACGACGTGCC GCTGCTGGTC AACATGCAGC CGGCAGGCTT CTATCTCGGC GAGGAATTCC ACCGCGCCGG CGGCGTGCCG GCCGTGATCG GCGAGTTGAT GCGGCACAAG CGCATCCATG AGGACGTCAT CACCGTCAAC GGCCGCAGCA TGGGCGACAA TTGCCGCGCG GCGCCGAAGC CGGACAATGA CGTGATCTGG TCCTACGACA AGCCGCTGGT GAAGGACGCC GGCTTCCTGG TGCTGCGCGG CAATCTGTTC GATTCCGCGA TCATGAAGAC CAGCGTGATC TCCAAGGAAT TCCGCGACCG CTATCTCAGC AACCCGAAGG ACCCGAATGC CTTCGAAGGC CGCGCCATCG TGTTCGAGGG GCCGGAGGAC TACCACGACC GCATCGACGA TCCCGCGCTC GCCATCGACG AGCACTGCGT TCTGTTCATC CGCGGCGCCG GCCCGATCGG CTATCCCGGC GGCGCCGAGG TGGTGAACAT GCAGCCACCG GCCGCGCTGA TCAAACGCGG GATCCTGTCC CTGCCCTGCA TCGGCGACGG CCGGCAGTCC GGCACCTCGG GCTCGCCCTC GATCCTCAAC GCCTCGCCGG AAGCAGCCGC CGATGGCGGG CTCGCCATCC TCAGGACCGG CGACAAGGTG CGCATCGACC TCAACAAGGG CTCGGCCAAC ATCCTGATCT CCGACGAGGA GGTTGCGAAG CGCCACGCCG AGTTGAAGGC CAAGGGCGGC TTCCCGTATC CCGCCAATCA GACGCCATGG CAGGAGCTCT ATCGCAACAC TGTGGGCCAG CAGGCCACCG GTGCCTGCAT GGAGCTCGCC ACGCGGTATC AGAATATCGC TGGCACTGTC GGCGTGGCAC GGCATAATCA TTGA
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Protein sequence | MTKSNGHAGN GADKGRKLRS QAWFNDPHNP GMTALYLERY LNFGLTRAEL QSGKPIIGIA QTGNDLSPCN RHHIELAHRV REGIREAGGI AMEFPTHPIQ ETGKRPTAAL DRNLAYLGLV EILFGYPLDG VVLTTGCDKT TPACLMAAAT VNIPAIVLSG GPMLNGWHEG QRTGSGTVVW KSRERLAAGE IDYEEFMQIV ASSAPSVGHC NTMGTASTMN ALAEALGMSL PGCAAIPAPY RERGQIAYET GKRIVDMVWE DLKPSDILTR KAFENCIVAN SAIGGSTNAP IHINALARHV GVELDIDDWQ KVGHDVPLLV NMQPAGFYLG EEFHRAGGVP AVIGELMRHK RIHEDVITVN GRSMGDNCRA APKPDNDVIW SYDKPLVKDA GFLVLRGNLF DSAIMKTSVI SKEFRDRYLS NPKDPNAFEG RAIVFEGPED YHDRIDDPAL AIDEHCVLFI RGAGPIGYPG GAEVVNMQPP AALIKRGILS LPCIGDGRQS GTSGSPSILN ASPEAAADGG LAILRTGDKV RIDLNKGSAN ILISDEEVAK RHAELKAKGG FPYPANQTPW QELYRNTVGQ QATGACMELA TRYQNIAGTV GVARHNH
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