| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3537 |
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| Symbol | |
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| ID | 5151466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3694875 |
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| End bp | 3696044 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558390 |
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| Product | putative component of multidrug efflux pump, mdtA-like protein |
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| Protein accession | YP_001239536 |
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| Protein GI | 148254951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT CACGAACCAT CGTCTGGATC CTGCTGGTCG CGGCCGTCGG CGGCGCCGGC
TATTATGGCT GGCAACGCTA TCAGGATGCC GAGTCGGCGA AGAAGACATC GGCACAGAAA
TCGGCGCGAC CGCCGGCCGT TCGGGTATCG ACCGCGCCGG TCGAGAGGAT CGATTTTCCA
GTGTTCCTGA CCGGCCTGGG CACCGTGCAG GGTTTCAATA CCGTCCAGGT CCGCACCCGC
GTCGACGGCC AGATCGACAA GATCGGGTTC ACCGAGGGCC AGCTCGTCAA GGAAGGCGAT
CTGCTGGTCG AGATCGATCC GCGGCCGTTC CAGGCTGCAT TGGACCAGGC CAAGGCCAAG
CGAGCCCAGG ACGAGGCCAA TCTCAACAAC GCCAATCTCG ATCTGCAGCG CTACACCAAG
CTCGGCGAGT TCGCGACGCG GCAGCAGACC GATACCCAGC GCGCCACCGT GGCGCAGCTC
ACCGCCCAGA TCTCGGCTGA CGAAGCTGCG ATCGCCAATG CCCAGACCCA GCTCAGCTAC
ACCCAGGTCA AGGCGCCGAT CTCCGGCGTT GCCGGCCTGC GCCAGGTCGA TATCGGCAAC
ATCGTCAACG CCTCGAGCCA GACGGGGATC GTATCGATCG CGCAGATCGA GCCGATCGCG
GTGATCTTCA CGGCGCCCGA AGGGGAGCTG CCCTACATCA ACGAGGCGCA GAAGGTCGCG
CCCTTGAAGG TGATCGCGTT CACCACCGAC GGCAAGAAGC AGCTCGCCGA GGGCAAGCTG
ATGGTCGTGA ACAACCAGGT CGACACGTCA AGTGGAACGA TCCGGCTCAA GGCGGTGTTC
GACAACAAGG ACCACGCGCT GTGGCCGGGT CAATCGGTCT CCACGCGACT GCTGGTGCGG
ACGCTCAAGG ACGCGACGGT GGTCCCCGAT GACGCGGTCC AGCATTCCAC CAGCGGGCTG
TATTCGTACA CGGTGAGCCC GGACAACAAG GCCGAGCTGC GCAAGGTGAA GGTCGGCGCG
TCGATCGATG GCCGCACGGT CATCGAGGAG GGGCTGACCC CCGGCCAGCA GGTGATCACC
GGCGGTCAGT TCAAAGTGCA GCCAGGCTCG GTCGTGACCA CTGCGGTGGC CAGCTCGGAG
CAGGCACCAG CTAAGGTCCG GCAGGAATGA
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| Protein sequence | MKTSRTIVWI LLVAAVGGAG YYGWQRYQDA ESAKKTSAQK SARPPAVRVS TAPVERIDFP
VFLTGLGTVQ GFNTVQVRTR VDGQIDKIGF TEGQLVKEGD LLVEIDPRPF QAALDQAKAK
RAQDEANLNN ANLDLQRYTK LGEFATRQQT DTQRATVAQL TAQISADEAA IANAQTQLSY
TQVKAPISGV AGLRQVDIGN IVNASSQTGI VSIAQIEPIA VIFTAPEGEL PYINEAQKVA
PLKVIAFTTD GKKQLAEGKL MVVNNQVDTS SGTIRLKAVF DNKDHALWPG QSVSTRLLVR
TLKDATVVPD DAVQHSTSGL YSYTVSPDNK AELRKVKVGA SIDGRTVIEE GLTPGQQVIT
GGQFKVQPGS VVTTAVASSE QAPAKVRQE
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