| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3438 |
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| Symbol | |
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| ID | 5149582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3586015 |
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| End bp | 3587214 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640558291 |
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| Product | putative secretion protein HlyD precursor |
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| Protein accession | YP_001239438 |
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| Protein GI | 148254853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0583205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.262777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCA AGGGTCGCCA TATTGCCATT GCTGCCGGGC TTCTGGCCGC CGTCGGAATC
ACGGCTTGGC TCTTGATCCC GGCACCGGTG CCGGTCGAGA CGGCCGCCGT GATGAAGGGA
AAATTCGTCG CCACCGTAGA TGAAGACGGC AAGACCCGCG TGCGTGAGCG ATACGTGGTC
GCCGCGCCGC TGGCGGGGAG GCTCAGCCGC GTTCGTTTCA AGGTTGGCGA CCCGGTCCAG
GTCGACGATG CCATAGCTAC GATTACCCCA TCTCCGGCAC CGTTGATGGA CCCCCGAACC
CGCCGCGAAG TCGAGGAAAT GCTAGGAACG GGCGAAGCCA ATCTGGAGCG CGCCAAGGCG
GTGGTCGAGC GGGCCCGGGC TCTGAGCGAT CAGGCCAACA CCGACTTGGC GCGGACGCGA
ACCTTGGCGC AGCAAGGGGC GGCAACGGCG CAGGCATTCG AACGTGCAGA ACTTGCGGCG
CGCCTCGCCG AACGAGATTT GCGCGCGGCG GAGTTTCAGG ATCATGCCGC TGAGCATGAA
ATCAGCCAAC TGCGCGCACT ACTGGCACGA TATAGTAACG ACGGGGGCGG GCAGCCAGAA
GCCTGGAACG TGGCATCGCC GGTCGCCGGC GTGGTGCTGA AGGTCGCGCA GGAAAGCGAA
ACGATCGTCC AGCCGGGGAC GCCGTTGCTG GATATAGGTG ACGCCAGTGA TATCGAAGTT
GTCGTCGATG TCTTGAGCAC CAATGCGGTG GAGATCCGTG CCGGCGCCGA CGTCACCATC
GATAATTGGG GCGGGGAAGG AAAGCTGAAG GGCCGGGTTC GACGGGTCGA GCCGGCAGCT
TTTACCAAGA TCTCGACGCT GGGCGTCGAG GAGCAAAGGG TGAATGTTCT CGTCGACATC
CTCTCGCCTT CGGAGCAGTG GGCGCGGCTG GGTGATGCCT ATCAGGTGGA CGTTCAGATC
GCTGTCTTTG CACGGGACGA AGCCACGATC ATTCCGGCTG GCGCGCTGTT TCGTCGCGGG
GAAGGCTGGA ACGTCTATGT ATCGAAGGAT GGACGCGCCG AATTGTGCGA GATCGAGCTC
CTGCGCCGTT CCGGTCGATT TGCGGCCGTT GCATCCGGCC TTAGTCCCGG GGAAGAGGTG
ATTGTCTATC CCAGCGACCG AGTTGTACCG GGTATACGCG TCGCATCACG ACCGCGCTGA
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| Protein sequence | MHIKGRHIAI AAGLLAAVGI TAWLLIPAPV PVETAAVMKG KFVATVDEDG KTRVRERYVV
AAPLAGRLSR VRFKVGDPVQ VDDAIATITP SPAPLMDPRT RREVEEMLGT GEANLERAKA
VVERARALSD QANTDLARTR TLAQQGAATA QAFERAELAA RLAERDLRAA EFQDHAAEHE
ISQLRALLAR YSNDGGGQPE AWNVASPVAG VVLKVAQESE TIVQPGTPLL DIGDASDIEV
VVDVLSTNAV EIRAGADVTI DNWGGEGKLK GRVRRVEPAA FTKISTLGVE EQRVNVLVDI
LSPSEQWARL GDAYQVDVQI AVFARDEATI IPAGALFRRG EGWNVYVSKD GRAELCEIEL
LRRSGRFAAV ASGLSPGEEV IVYPSDRVVP GIRVASRPR
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