Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3334 |
Symbol | |
ID | 5154447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3490415 |
End bp | 3494728 |
Gene Length | 4314 bp |
Protein Length | 1437 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558194 |
Product | putative methylase/helicase |
Protein accession | YP_001239341 |
Protein GI | 148254756 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0476558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCG AGACGAGCTG CCATACAGCA TCCTTTGCTC TGCTGGCGCG CGCCAAGGCC GTCCTTCGTG CGGCTGAGCT GCTGCTGCCA ATCCTCGCCC GTGGCGAGCG CATCGATGCA AGGTGCCTGC GCCTGGTCAT GCAGACCGCG TTTGGCGCCA GTGATGCCGA CGGGAGCTGG GATTGGAAGA CGGCCTACGA GGCCTGCGAG GTCGCTTCTG TTCTGTTCCT GGCCAAGTAC GGTCCTGCGA TGATCAAGGC GAGCCATGGC ATGCCGTCGG CCATGTTGCC GATGGTCGCC AAGATCGCAG CCCTTCTGCC GAGCCATACC AGGCGCTCGC TAGAGAGCCA GAGTTTTCAG CAGTTCTCGA CGCCGTTGCC GTTGGCGCTT GCTGTGGCCG CAGCGGCGCA AGTGACATCG GCCGATCGTG TGCTGGAGCC ATCGGCAGGG ACGGGGAGCC TGGCTGTCTT CGCGGAGCTC GCCGGCGGCG CGCTCCTGCT CAATGAGCTC GCTGCAAGCC GCGCCGCCTT GCTCGATCTG GTGTTTCCGG GCGTGAGTGT GACGCGCTTC GATGCCGCGC AGATCGATGA TCATCTCGAT GCCGCCTGCG TCCCAAGCGT CGTCCTGATG AACCCGCCGT TCTCGGCGAC AGCGAACGTG GATCGCCCTC TGGGCGATAC GACGTTGCGC CATCTCTCTT CGGCGCTCGC TCGGCTCGGA GATGGGGGAC GACTGGTCGC AATCACAGCC GCCAGCTTTG CGCCGGACAA TCCGACCTGG ACGGATGTTT TCGTGTGTCT GCAGGAGCGG GGCCGCCTCG TCTTCTCTGC TGCGATCGAT GGCACTGTCT ACGCGCGGCA GGGGACGACG ACGAGCACAC GGATGCTCGT GATCGACAAG CAGCCGCCGC GAGATCCTCG TGTCTTTCCG CAGTCGGCTG GGATGGCGCC TGACGCGAGG GCCTTGCTTG GTTGGATCAC GGCGCTCGTA CCGCCGCGGC TGCCCATGGC AGGCCGTTTT GTTGCGCAGA TGGGGCAGCG TGCCGGTCTC CGTCCGAGAG ACCAACGCGC ATTGGTATCT AGCTGCTCCT TTCCATCGCC AATGTCGTCC GAGCCTGCGG TCAGTGAGCT CGCTTACGAG CTGATGGATG ATGTGCCCGC GGAAGGATCC CGCCTGACTG ACGCGCTATA CGAGGCGTAT CAGCTGCAGT CTATCCGCAT CCCGGGAGCG CAGCCGCATC CCACGAAGCT CGTGCAATCC GCCGCTATGG CGTCGGTCGC TCCGCCCATA CCCACCTATC GGTCGCATGT GGTGCCCCGG CTCGTAACCG ATGGCGTGCT GTCGGACGCG CAGCTCGAGA GCATCATCTA TGCCGGCGAG GCGCATGCTG GCTTCCTGGC GGGTGTCTGG ACTGTCGACG AGACCTTCGA CCAGGTTTGT GCGGCCAGCG AGGACACCGA GGGCGCGGTA CGCCTCCGGC GCGGCTGGTT CCTCGGCGAT GGCACGGGCG CCGGGAAAGG CCGCCAGGTC GCGGGCATCC TGCTCGACAA TTGGCTGAAG GGCCGGCGCC GGGCGATCTG GGTCAGCAAG TCCGACAAGC TGATCGAGGA CGCCCAGCGC GACTGGGCGG CGCTCGGCAT GGAGCGGTTG CTGGTCACGC CGCTGTCGCG CTTCCGCCAG GGCACGCCGA TCCGGCTCGA TCAAGCCATC CTTTTTACGA CCTACGCCAC GCTACGAACC GACGAGAAGG CCGAAAAGCT TTCCCGCGTC CGCCAGATCG TCGACTGGGT GGGGCGGGAT TTCGATGGCG TGATCATCTT CGACGAGAGC CATGCGATGC AGAACGCCGC GGGCAACAAG GGCGATCGGG GCGAGCAGGC GGCTTCGCAG CAGGGCCGCG CCGGCTTGAG ATTGCAGCAC GCGCTGCCCA ATGCCCGCAT CGTCTATGTC TCAGCAACAG GCGCGACCAC CGTCCATAAT CTGGCCTATG CCCAGCGGCT CGGATTGTGG GGCGGTGCGG ATTTCCCGTT TGCGACGCGG GCGGATTTCG TGGCGGCGAT CGAGGAGGGC GGGGTTGCGG CCATGGAGGT GATGGCCAGG GACCTCAAGG CCCTCGGCTT GTACGCTGCA CGGTCGCTGT CCTTCGAGGG CATCGAATAC GAGCTGCTCG AGCACCGGCT CACGGACGAG CAGATCAGGA TTTACGACGC TTATGCGGAG GCGTTCGCGG TCATTCACAA CAATCTCGAG GCCGCGATGC GGGCGGCCAA CATCACCGGC GCTACCTGCA CGCTGAACGC GCAGGCCAAG TCGGCGGCGC GCTCGGCTTT CGAATCCGCC AAGCAGCGAT TCTTCGGGCA CCTCTTGACC TCGATGAAGA CGCCAACGCT GATCAACGCG ATCAAGCGTG ATCTCGAAGC CGGCCATGCC GCAGTCATCC AGATCGTCTC GACCGGCGAA GCCCTGATGG AGCGCCGGCT GGCCGAGATC CCGACCGAGG ACTGGCGCGA CGTCCAGGTC GACATCACGC CCCGCGAATA TGTCTTGGAC TATCTCGCCC ATTCCTTCCC GGTCCAGCTC TACGAGCCGT TCACGGACGG CGACGGCAAT TTGTTGTCGC GGCCAGTCTA CCGCGATGGT CAGCCGGTCG AGAGCCGCGA AGCGGTCGCG CGCCGCGACC AGATGATCGA GCATCTTGCC TCGCTTGCTC CGGTGCCCGG TGCGCTCGAT CAGATCGTCC AGCGGTTCGG CACCGATATG GTGGCCGAGG TCACAGGGCG ATCGCGACGG ATCGTCCGTA TCCGTGATCG GCTCGCGGTC GAGACGAGAG CGGCCTCTGC AAACCTCGCC GAGGCCGCGG CGTTCATGGA TGACCAGAAG CGCATCCTGG TGTTCTCGGA TGCCGGCGGC ACCGGGCGCA GCTACCACGC CGAGCTCTCG GCCAAGAACA GGCGGCTGCG GGTGCATTAT CTTCTTGAGC CGGGCTGGAA GGCGGATGCC GCGATCCAGG GGCTTGGGCG GACCAACCGC ACCAACCAGG CACAACCGCC GCTGTTTCGC CCGATCGCGA CCGACGTGAA GGCCGAGAAG CGCTTTCTGT CGACCATCGC GCGCAGGCTC GACACGCTGG GGGCAATCAC CCGTGGGCAG CGCCAGACCG GCGGGCAGGG ATTGTTCCGC CCTGAGGACA ACCTCGAAGG CCCGCACGCA CGCGATGCGC TGCGTCAGCT CTATGGGCTT CTGGCGCGCG GCCAGGTCGG CAGCTGCTCA CTGCAGCGCT TCGAGCAGGC CACGGGATTG AAGCTGACCG ATGAGAATGG CCTGCGCGAC GAGCTGCCGC CGATTACGAC GTTCCTCAAC CGGCTGCTCG CGCTGACGAT CGAGCTGCAG AACATTCTCT TCACGGTATT TGAGCAGCTG CTGGCCGCGC GGATCGAGGG TGCCATCGCA TCGGGGACTT ACGATGCTGG CCTGGAGACG CTGCGAGCCG AGAGCTTCGT CGTCACCGAG CGGCGCACGA TCTACAGCCA TCCAGCAAAC GGCGCTGAGA CCCATCTCGT CACGATCACC CAGCGCGATC GCAATCGGCC GATGCCGCTG AACGAGGCGT TGGAGCGGCT CCTGCAGCGC CGCGCTGTTC CGCTACGCAA TGTTCGCTCG GGGCGAGCGG CGATCCAAAT GCCGGCGCCG AGCTGGCTGC TCGACGATGG CGAGATCGAG CCACGAGCCC AACTGATCGG ACCGATGGGA CGCCGCACTC TGCCGCTGGC CAAGCTCGCC GAGCATGATT GGGTCGAGGC CGATCGCGAG CAGTTCAAGG CCGGCTGGAG CGCGGAGCTT GCATCCATCC CAGAGTTCAC GACCAGCACG ATCTACCTCG TCACCGGGCT CCTGCTGCCG ATCTGGAAGC GCCTCCCTCA GGAGTCGACG CGGGTCTACC GTCTCCAGAC CGATGCAGGC GAGCGCATCA TCGGCCGGAA GGTCCCGCTC AGTTGGGTCA CGGCAATGTC GGCGGAGAGA CCGGCGCTCG CAGCTGAAGA GGCGTTCGCT GCACTGCTGC GCGACGGCTA TGTGCTCGAT CTCGCCGAAG GCCTGCAGCT GCGGCGAGCC CGCGTCATGG GTGTCGATCG GATCGAGCTG TCGGGCTTCA CCGAGGGGCT CAGAGATTGT CTCAGGGTCT ATGGGCTGTT CGGCGAGATC ATCTCCTGGA AGCTGCGGAT GTTCGTGCCC ACCGATGCAA GCGGCGCGGC GGTCCTGACC AAGGTTCTGG AGCGCTTTCC GATTGCGCAA GTCCGTGGGC GGGAGCGACC GTGA
|
Protein sequence | MITETSCHTA SFALLARAKA VLRAAELLLP ILARGERIDA RCLRLVMQTA FGASDADGSW DWKTAYEACE VASVLFLAKY GPAMIKASHG MPSAMLPMVA KIAALLPSHT RRSLESQSFQ QFSTPLPLAL AVAAAAQVTS ADRVLEPSAG TGSLAVFAEL AGGALLLNEL AASRAALLDL VFPGVSVTRF DAAQIDDHLD AACVPSVVLM NPPFSATANV DRPLGDTTLR HLSSALARLG DGGRLVAITA ASFAPDNPTW TDVFVCLQER GRLVFSAAID GTVYARQGTT TSTRMLVIDK QPPRDPRVFP QSAGMAPDAR ALLGWITALV PPRLPMAGRF VAQMGQRAGL RPRDQRALVS SCSFPSPMSS EPAVSELAYE LMDDVPAEGS RLTDALYEAY QLQSIRIPGA QPHPTKLVQS AAMASVAPPI PTYRSHVVPR LVTDGVLSDA QLESIIYAGE AHAGFLAGVW TVDETFDQVC AASEDTEGAV RLRRGWFLGD GTGAGKGRQV AGILLDNWLK GRRRAIWVSK SDKLIEDAQR DWAALGMERL LVTPLSRFRQ GTPIRLDQAI LFTTYATLRT DEKAEKLSRV RQIVDWVGRD FDGVIIFDES HAMQNAAGNK GDRGEQAASQ QGRAGLRLQH ALPNARIVYV SATGATTVHN LAYAQRLGLW GGADFPFATR ADFVAAIEEG GVAAMEVMAR DLKALGLYAA RSLSFEGIEY ELLEHRLTDE QIRIYDAYAE AFAVIHNNLE AAMRAANITG ATCTLNAQAK SAARSAFESA KQRFFGHLLT SMKTPTLINA IKRDLEAGHA AVIQIVSTGE ALMERRLAEI PTEDWRDVQV DITPREYVLD YLAHSFPVQL YEPFTDGDGN LLSRPVYRDG QPVESREAVA RRDQMIEHLA SLAPVPGALD QIVQRFGTDM VAEVTGRSRR IVRIRDRLAV ETRAASANLA EAAAFMDDQK RILVFSDAGG TGRSYHAELS AKNRRLRVHY LLEPGWKADA AIQGLGRTNR TNQAQPPLFR PIATDVKAEK RFLSTIARRL DTLGAITRGQ RQTGGQGLFR PEDNLEGPHA RDALRQLYGL LARGQVGSCS LQRFEQATGL KLTDENGLRD ELPPITTFLN RLLALTIELQ NILFTVFEQL LAARIEGAIA SGTYDAGLET LRAESFVVTE RRTIYSHPAN GAETHLVTIT QRDRNRPMPL NEALERLLQR RAVPLRNVRS GRAAIQMPAP SWLLDDGEIE PRAQLIGPMG RRTLPLAKLA EHDWVEADRE QFKAGWSAEL ASIPEFTTST IYLVTGLLLP IWKRLPQEST RVYRLQTDAG ERIIGRKVPL SWVTAMSAER PALAAEEAFA ALLRDGYVLD LAEGLQLRRA RVMGVDRIEL SGFTEGLRDC LRVYGLFGEI ISWKLRMFVP TDASGAAVLT KVLERFPIAQ VRGRERP
|
| |