Gene BBta_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3320 
Symbol 
ID5155405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3476319 
End bp3477053 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID640558180 
Producthypothetical protein 
Protein accessionYP_001239327 
Protein GI148254742 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAATC TGTACTCGAT GACGAAGAAC GCGGACGCGA TCCGCCGGCT GTTCGGCGTT 
TCGCCTGGGA GCGACCACAC GGGCAATTTG CCGTCCATGC CCGGCATCTT CCCGGACTAT
CCGGCTCCCA TCATCCGCAA TTCCGCCGCC GGCCTGAAAC TCGCGATGGC TCGCTGGGGC
ATGCCGTCCT CAGCCAAGGC GCTCATGGAC GCCACCAAGA AGCGGGCCGA GAAACTGCAG
GCGAAGGGCA AGGTGGCAGA CTTCAAGGAA CTGCTGCGGC TCGAGCCGGA CAGCGGCACG
ACCAACATCC GCAATGTGAC CAGCGCGCAC TGGAAGCGTT GGCTCGGCCC GGAAAATCGG
TGCCTGGTGC CGTTCACCAG TTTCTCCGAG TACGACACCA TCGATGGCAA GAAGGTGCCG
GTCTGGTTCG CTGCCGACGA GAGCAGGCCG CCGCTGGCGT TCGCCGGCCT CTGGACCAGC
TGGACGTCGG TCCGCAAGGC GAAGGAGGGC GAGGTCACGA TCGACGTCTA TGGCTTCCTG
ACGTGCGAGC CGAACGCCGA GGTCGGCCGC GTCCACCCGA AGGCGATGCC GGTGATCTTG
ACGTCTCCCG AGGAATTTGA CGCCTGGCTG CGCGCCCCCT GGGACGAGGC GAAAGCGCTG
CAGAGGCCGC TGCCGGACGG CGCGCTGCAG ATCGTGGCGA CCGGGCCAAA AGAGGATCCC
GCAACGTCCG GCTAG
 
Protein sequence
MCNLYSMTKN ADAIRRLFGV SPGSDHTGNL PSMPGIFPDY PAPIIRNSAA GLKLAMARWG 
MPSSAKALMD ATKKRAEKLQ AKGKVADFKE LLRLEPDSGT TNIRNVTSAH WKRWLGPENR
CLVPFTSFSE YDTIDGKKVP VWFAADESRP PLAFAGLWTS WTSVRKAKEG EVTIDVYGFL
TCEPNAEVGR VHPKAMPVIL TSPEEFDAWL RAPWDEAKAL QRPLPDGALQ IVATGPKEDP
ATSG