| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3311 |
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| Symbol | |
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| ID | 5154324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3465586 |
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| End bp | 3469644 |
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| Gene Length | 4059 bp |
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| Protein Length | 1352 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640558172 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001239319 |
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| Protein GI | 148254734 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.184729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC CCAGCTCCGC CCCTTTCCCG GATCTCACGC CCGCACAGGC TCGTGCCGCG
AGGGCCCTCT TGGCCTGGTC CCAACAGGAC CTAGCGACCC ATGCCAATGT CGCAACCTCT
ACCGTAGCCG ACTTCGAACG GGGCCGCCGA ACGCCGGTTC CGCAGAACGC AGAAGCCATG
CGTGCGGCTT TCGAACGGGC CGGGATCTCG TTTCCGGCAG GAGGCGCCGT ACTGGGGCCG
GCCCTGCCGA AGCTTGCCGA CCTGACCAAG TCCGGAGCGC CAATCCGATA TGTAAACGGC
ACCGACCTGG CTCAATGGGC GGAGCGCCGC GACGGCCAGG CTTCAATGCC AACCCTGCTC
TCGAAGCTCG TTCGGGCAAG CGGAGGCGCC ACGCTGCATT TCCCGTCCGA TGAAGCCGTC
CAGTTTGCAG GTTGGGACGG CACCACCCAT GCCGCCTCTG CGTCCGAATA CGTCCCGGCC
GGGGCCACCG GCTGGGAGAT CGGCACACAG CGCGAGGGAA TCGCCGGCAA AGCCAATGAG
GATTACGTAA AGCGAACCAA AGATCCGCTC GGCCTAAACC AGAGCGAAAC CTCCTTCGTT
TTCGTCACAC CGCGTCCTTG GCCCAAGAAG GACGAATGGG CTCAAGAGAA ACGCGCTGAA
GGTCCCTGGA AGGATGTCAA AGCCTATGAC GGCACGGATC TGGTCCACTG GATCGAACAG
TACCCGGCGG TAGGCCAGTG GCTGGCGAGC GCCCTAGGAA AGCGCCCAGC TGGCGTGCGC
CAACTGGAAG AAGTTTGGGA CGAGTGGTCC CGCGCCACCC AGTGGCCGCT TCCTCCCGAC
GTGGTCCTCA GCGATCGTAG CGAGGACAGC GCTGTCCTGC TCCGATGGTT GCGCGGCGAG
CATTCGGTCG TCGCCTTCCA GAACGAAAGC TCCGAGGAAG TCGCGGCCTT TGCCTACGCC
ACGATCAATC AGCTCCCCCC CGATATCGCG GAGCATTATT TCGCGCGCTG CGTCGTTGCC
TCAAGCTCCG ACGCAGCCCG GCAGCTTGCG AGCAGTCGTA CACCACTGAT CATCGTCATC
CTCGAGCCTG AGGCCGGAGT TGCTGAGGCC ATCTCAACAA AAGGCCATCA CGTTCTGGCG
GCGTTCGGCC AGAACCCTGG CTCAATCGGC ACCGTGCGGA AGCTGAGTCG TCCGTCGCGC
GACGGGATCG AAGCCGCACT GATCGATAGT GGCCTTCCGG AAGAGAAGGC CAAGGCTTTT
GCCCGGGATT CTGCCCGAAG CTTAGCGATT CTGCGCCGGT TGATGCCCGG GGTTGCGAGC
CGATTACCTA ATTGGGCTCA GGGTACGATT TCCCGGTCAT TGCTCGCGGC GTTATTGGCC
GGAATGTGGG ATGAAGACAA AGAAGCGGAC AGGGCGATCC TGTCGCGCCT GTCTGAGATG
CCCTATGAGG CCTTCATCGC TAGTATCGCG CCCTACGTCG GCGAGTTCGA CAGCCCGATC
CGCAAGGTTG GAGCAGCCTG GAAAGTGGCT TCGCCACGGG ACGCCTGGCT GCTTGTGGCC
TCTCATTTCA CGGCCGCGGA TATCGAGCGA TACGAGGCCG CCATCGTCGA CGTGCTGAGT
GCGGCCGATC CGCGATACAC CCTGAGCCCC GAAGACCGTT GGTACGCGTC GATGCGGGGC
ATCGTACCGG CCTATTCCGC CTACTTGAGA CATGGCTTGG GCGAGACCCT TATTTTGCTT
GCGCTGTTCG GGGATCGCGC GGCCATGGTG CCCCACGCCT CTCAATATCC CGACATGATC
GTCCGGAAAG TGCTGCGAGG TGCCGACAGC CAGCGCTGGT GGTCCTTGTC GCGAGATTTC
CAGCTGCTCG CGGAAGCTTC CCCAGACGAA TTTCTCTCGG CAGTGGACGA CAGCCTCGAT
AGTGAAGATC CACCGATCGC GGCACTCTTC AAGCCTGACG AGAACCCTGT TTTCGGCAGC
GCCGAGCACA TCTCGGACTT GCTGTGGGCG CTAGAGTCGC TCGCCTGGTC GCCGCAGCTT
TTGCTTCATG TTTCCCTCGT GCTAGCCCGA TTAGACGAGA TGGACCGCGG CGGCAGGTAT
TTGAACCGAC CGGCGGCCAG CCTTCGCACC GCGTTCCTGC TCTGGAGCCC GCAGACGAAC
GCTACGTTCA GCCAGCGCCT CAAAGTTTTG GACCGGATCA GGAAGCGCTA TCCGAAGCCC
GCTTGGAAGC TGATGCTCGG TATCTTGCCC ACCGGTCACG ATTCTTTCTC GCCAACGCCG
TCCACGCGGT GGCGAGACTT CTCGACCGAC AAGAAGGAAG TCGTCACCTA TCAGCTCATC
GGGAAAGGGG CGGAAGCGGT TTTGGATCGC CTCCTGGAGG ACATTGGCTC GAACGCCGCC
CGCTGGGTCG CGCTACTTGA CCGATGGAGT GATTTGGGCG ACCGCCGCCA AAAGGCGGCC
GAGCAGCTAA AGCAGGTCGC TCAGGGCAAT CCCACGAAGG ACGATCGCGA GCTGCTTCGT
ACTAAACTTA GGGGCGTGCT GCACCATCAT CGAAGCTTCA GGGATGCCGA TTGGGTGCTT
CCCGAGGAGG ACATCGCAGA ACTTCAGGTA ATTTACGATG CCCTCGCGCC GCTGGATCCA
ATCGAGAGCG TTGCTTGGTT GTTTGACCCC TCGGTCTCCC TGCCCAACCC CACTGGCGAC
TGGGACAAGG ATGAGAAGCT CCTTCAGTCG CAAAGAGCGG TTGCAGCAGC TGCTCTCCTC
CGAGCCCATG GGACAGAGAG ATTCTTCGAC CTGATCGAGA CGGTCCGTGA ACCCGGATTT
CTCGGTCAAG CGATCGCGCA ATCTGATGCA CCTGAAGATA TTCAGAGAAC ACTTTTGGTG
CAGGCGCTAC GCAGCGAACG AGATGCAGAT CAGGTCTTCG CGCGAGGTTT AGTCTGGACC
AAGTACCGGA GTGCTGGCCG CGCATGGGCC GAAGGCTTGT TCGATGAGAC GCTGAAGGGC
GACTGGGGCG ACAAGGCACT CCTGACGATC CTTCTGGCCT TGCCCGCAGC GGGCTGGGTT
TGGAGCCTCA CCAAACGTGC GGGCGAGGTC ATCGAGGCAT TGTATTGGAA GCGGTTCAAT
ATCTTGTGGA GCAAGGAAGA CGACGCCGAC CCCACATATG TCGTCGAGAA GCTGATCGAG
GCGGGACGAG CACGCGCCAG CGTCCACTTT ATTGGCTATC ACCTGCATGG CGGAACGACA
TTCGCCTCTG AGCTACTTGC GAGAGCACTG TTCGAGGCAG GAAGCCAGCC GGTCGAGCGT
GAACTGGACG GGAACGACCA GATGCTCCAG TACTATGCGG AGGAGATATT CAAACGCCTA
GACGAGGCGA AAGATATGTC GACTGATACC CTCGTCAAGC TGGAATGGCT TTATCTGCCT
CTATTTGAGC ACTCACAGCG CAAAGCGAAG TGGGTCATGG CAGAGCTTGC TTCCAATCCC
GACCTTTTCG TTCAACTACT TTCGGCCGTC TATAAGCCGA CGCAAGATAG TGAGGTGGTT
GAACCACCCG TCGAAAATGA GGAGCATGCC CAGGCCGTCG CAAACCAAGC TTACAGGCTG
CTGCGAATAT GGGATGTGAT CCCAGGCACG CAAGCAGACG GATCTATTGA CGGCGCGAAG
CTGGAAGCTT GGATCAAAGA AGCACGCAAA CTTGCGCATG CCTTGGGCCG GGGTGTCATT
GCGGACCAGA AGATCGGGGA GCTGCTTTCG GCCTCAAAGG TCGACGCAGA CGGCATCTGG
CCCGCTGTAC CCGTCCGCGA GGTGATCGAA GCGATCCGCA GTCGCGATCT CGAAACGGGG
GTAATGGTCG GGAAGTTTAA CCGCCGGGGG GTGACATCGC GGGCGTATGG GGCCGGTGGT
AGTCAGGAAA GGCAGCTTGC CAAGCAATAC CGCGACTGGT CCCAGGCCAC GGCATTTGAT
TGGCCGCGCA CATCGGGAAT TCTTGAGAAT CTCGCCAAGG ATTACGACCG CCAAGCAACG
GCACACGACC AAGATGCGGA GCGGCTAGAT TGGCGGTAA
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| Protein sequence | MKKPSSAPFP DLTPAQARAA RALLAWSQQD LATHANVATS TVADFERGRR TPVPQNAEAM
RAAFERAGIS FPAGGAVLGP ALPKLADLTK SGAPIRYVNG TDLAQWAERR DGQASMPTLL
SKLVRASGGA TLHFPSDEAV QFAGWDGTTH AASASEYVPA GATGWEIGTQ REGIAGKANE
DYVKRTKDPL GLNQSETSFV FVTPRPWPKK DEWAQEKRAE GPWKDVKAYD GTDLVHWIEQ
YPAVGQWLAS ALGKRPAGVR QLEEVWDEWS RATQWPLPPD VVLSDRSEDS AVLLRWLRGE
HSVVAFQNES SEEVAAFAYA TINQLPPDIA EHYFARCVVA SSSDAARQLA SSRTPLIIVI
LEPEAGVAEA ISTKGHHVLA AFGQNPGSIG TVRKLSRPSR DGIEAALIDS GLPEEKAKAF
ARDSARSLAI LRRLMPGVAS RLPNWAQGTI SRSLLAALLA GMWDEDKEAD RAILSRLSEM
PYEAFIASIA PYVGEFDSPI RKVGAAWKVA SPRDAWLLVA SHFTAADIER YEAAIVDVLS
AADPRYTLSP EDRWYASMRG IVPAYSAYLR HGLGETLILL ALFGDRAAMV PHASQYPDMI
VRKVLRGADS QRWWSLSRDF QLLAEASPDE FLSAVDDSLD SEDPPIAALF KPDENPVFGS
AEHISDLLWA LESLAWSPQL LLHVSLVLAR LDEMDRGGRY LNRPAASLRT AFLLWSPQTN
ATFSQRLKVL DRIRKRYPKP AWKLMLGILP TGHDSFSPTP STRWRDFSTD KKEVVTYQLI
GKGAEAVLDR LLEDIGSNAA RWVALLDRWS DLGDRRQKAA EQLKQVAQGN PTKDDRELLR
TKLRGVLHHH RSFRDADWVL PEEDIAELQV IYDALAPLDP IESVAWLFDP SVSLPNPTGD
WDKDEKLLQS QRAVAAAALL RAHGTERFFD LIETVREPGF LGQAIAQSDA PEDIQRTLLV
QALRSERDAD QVFARGLVWT KYRSAGRAWA EGLFDETLKG DWGDKALLTI LLALPAAGWV
WSLTKRAGEV IEALYWKRFN ILWSKEDDAD PTYVVEKLIE AGRARASVHF IGYHLHGGTT
FASELLARAL FEAGSQPVER ELDGNDQMLQ YYAEEIFKRL DEAKDMSTDT LVKLEWLYLP
LFEHSQRKAK WVMAELASNP DLFVQLLSAV YKPTQDSEVV EPPVENEEHA QAVANQAYRL
LRIWDVIPGT QADGSIDGAK LEAWIKEARK LAHALGRGVI ADQKIGELLS ASKVDADGIW
PAVPVREVIE AIRSRDLETG VMVGKFNRRG VTSRAYGAGG SQERQLAKQY RDWSQATAFD
WPRTSGILEN LAKDYDRQAT AHDQDAERLD WR
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