Gene BBta_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3254 
Symbol 
ID5153202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3408495 
End bp3409679 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content64% 
IMG OID640558119 
Productputative thiolase/acetyl-CoA acetyltransferase 
Protein accessionYP_001239266 
Protein GI148254681 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.511595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGG AGAAGACTCA GCGCGCATCC TACGATGGGG TCGTCATGGC CGTTCCGGTC 
ACGATTCCTT ACATGCGCTA TTCGATCGAA AGCGCGCAAT GGTGGATCGG CCGCGCCTTG
AGCGCGCTCG TGGCGCAGGC CGGGATCAAG AGTTCGGATA TCGACGGCCT GTGTGTCTCC
AGCTTCACGC TGGGGAACGA CAGCGGCGTT GGTCTGACCC AGCATTTCGG TCTGTGCGTG
CGGTGGCTTG ATACGATCCC GCTCGGCGGC GCGAGTGCCA TCGCGGCGGT GCGGAAGGCG
GCGCGGGCGG TCCAGGCGCG TGACGCTGAT ATCGTGGCCT GCGTGGCCGG TGATGCCAAT
CATGTCGATT CGTTCCGGCA GACACTCGAG AATTTCTCCC GCTTCAATCA AGACGCCGTC
TATCCCTACG GAGCAGGCGG CGCCAATGCG AGCTTTGCGT TGATTGCGCG CAATTACATG
CGCACCTACG GTGTGACGCG CGAGGATGTC GGCAGGATCG CGGTTGCGCA GCGCGCCAAC
GCGCTCCGCA ATCCGAATGC CCTGATGAAG ACGCCGCTGT CGATCGAGCA ATATCTCGCC
GCCCGCCCGA TTTCGGATCC GATTCACCTG TTCGACTGCG TCATGCCGTG CGCCGGCGCC
GAGGCGTTTC TGGTGATGCG GGACGACACG GCGGCATCGC TCGGATTGCC GGCCGCCCGC
GTGCTTTCGA CGATCGAGCG GCACAACGCA TTTGCGGATG ATCCCATGCA GCTACGCGGC
GGCTGGGCCA AAGATATTGG CGAACTCTAC GCCATGGCCG GGGTCACGCC GGACGATCTC
GATGTCGTCC AGACCTATGA CGATTACCCG GTCATCACCA TGATGCAATT CGAGGATCTC
GGCTTCTGCA AGAAGGGCGA AGGGGCGGCC TTCGTGCGCG AGCACGATCT CACGATCGAT
GGCGACTTCC CGCATAATAC GTCCGGCGGC CAGCTCTCGG TCGGGCAGGC CGGTGCGGCC
GGCGCCTATC TCGGACTCGT CGAAGGGCTT CGGCAGGTGC TGGGAACGGC AGGGCCGACC
CAGGTGAAAG CGGCGCGGCT CGCTCTCGCG TCTGGCTTCG GAATGATCAA TTATGATCGC
GGTCTCGCCT CGGGGGCCGT GATCCTGGCG GGACCTGCGC GATGA
 
Protein sequence
MTVEKTQRAS YDGVVMAVPV TIPYMRYSIE SAQWWIGRAL SALVAQAGIK SSDIDGLCVS 
SFTLGNDSGV GLTQHFGLCV RWLDTIPLGG ASAIAAVRKA ARAVQARDAD IVACVAGDAN
HVDSFRQTLE NFSRFNQDAV YPYGAGGANA SFALIARNYM RTYGVTREDV GRIAVAQRAN
ALRNPNALMK TPLSIEQYLA ARPISDPIHL FDCVMPCAGA EAFLVMRDDT AASLGLPAAR
VLSTIERHNA FADDPMQLRG GWAKDIGELY AMAGVTPDDL DVVQTYDDYP VITMMQFEDL
GFCKKGEGAA FVREHDLTID GDFPHNTSGG QLSVGQAGAA GAYLGLVEGL RQVLGTAGPT
QVKAARLALA SGFGMINYDR GLASGAVILA GPAR