| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3225 |
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| Symbol | |
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| ID | 5152749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3377699 |
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| End bp | 3379138 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640558091 |
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| Product | putative sugar ABC transporter, periplasmic substrate binding protein |
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| Protein accession | YP_001239238 |
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| Protein GI | 148254653 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0178955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGATC GCGAGAAGAA CCTGTTTGCA TCCTATGCCG GCAAGCGCAT CAGCCGGCGT
GACCTGCTCG ACGGCGCCGC CAAGCTCGGC ATCGCCGGCG CCGCAGCCAA TGCTGCCTTT
GCCTCCACGA TGTCGAAGGC CCTGGCGGCG GACTTCAATT GGAAGGCGCA GAGCGGCAAG
ACCGTCAAGC TGCTCCTGAA CAAGCATCCT TATGTCGATG CGATGATCGG AAATATCGAG
GCTTTCAAGA GCCTCACAGG CATGAACATC ACCTACGACA TCTTCCCGGA GGATGTCTAT
TTCGACAAGG TCACGGCGGC GCTGTCGTCG AAGTCCGATC AGTACGACGC CTTCATGACC
GGCGCCTACA TGACCTGGAC CTATGGTCCG GCCGGCTGGA TCGAGGACCT CAACACCTAC
ATCAAGGATC CCGCCAAGAC CAATCCGGCG TTCGCCTGGG ATGATGTGCT GCCCGGCCTG
CGCTCGTCGA CCGCGTGGGA CGGTGTCGCC GGCTCCGAGC TTGGCTCGGG CAAGGCCAAG
CAATGGTGCA TCCCGTGGGG CTACGAGCTC AATAACGTCA CGTATAACCG CAACATCTTC
AACAAGGTCG GCGTGAAGCC GCCGGGCAAT CTCGATGAGA TGCTCGAGGT CGCTGCCAAG
ATCACCAAGG ATGCCGGTGG GCCCTATGGC GTCGGCGTGC GCGGCTCGCG GTCCTGGGCC
ACCATCCATC CGGGCTTCCT GTCCGCCTAT GCCAATTTCG GGCAGAAGGA CTTCGTGATG
GAGGGCGGCA AGCTCAAGGC CGCGATGAAC ACCAAGGCCT CGAAGGAGTT CCACGACAAA
TGGGTCAAGA TGATCCAGGG ATCGGGCCCG AAGAATTGGT CGACCTACAC CTGGTACCAG
GTCGGCACCG ATCTCGGCGC CGGCGCCTCC GGCATGATCT TCGATGCCGA CATCCTCGGC
TACTTCATGA ACGGCGGCGA GAACAAGGAG CGCGGCAATC TCGGCTATGC GCCGTTCGCG
GCCAATCCGG CCGCCAAGGC GCCGACGCCC AACGTCTGGA TCTGGTCGCT GGCGATGTCG
AGCTTCTCCA AGCAGAAGGA TGCGGCCTGG CTGTTCATGC AGTGGGCGGC TTCGACCGAG
CACGGCCTGT TCGGCGCCCG CAAGATGGAC TTCGTCAATC CCGTCCGCAC CTCGGTGTGG
AAGGACAGCG AATTCCGCGA CCGCATCGCC AAATCCTATC CGGGCTATCT CGAGCAGCAT
GACCTCTCGG CACCGGGGGC CAAGATCTAC TTCACGGCGC AGCCGCTGTT CTTCGATCTC
ACCACGGAGT GGGCGGCCTC GCTGCAGAAG ATGGTGGCCA AGGAGGTCAG TGTCGATGAA
GGTCTCGACA AGCTCGCCGA GAGCATCAAC CGCCAGCTGA AGCAGGCCGG CCTCGGTTGA
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| Protein sequence | MYDREKNLFA SYAGKRISRR DLLDGAAKLG IAGAAANAAF ASTMSKALAA DFNWKAQSGK
TVKLLLNKHP YVDAMIGNIE AFKSLTGMNI TYDIFPEDVY FDKVTAALSS KSDQYDAFMT
GAYMTWTYGP AGWIEDLNTY IKDPAKTNPA FAWDDVLPGL RSSTAWDGVA GSELGSGKAK
QWCIPWGYEL NNVTYNRNIF NKVGVKPPGN LDEMLEVAAK ITKDAGGPYG VGVRGSRSWA
TIHPGFLSAY ANFGQKDFVM EGGKLKAAMN TKASKEFHDK WVKMIQGSGP KNWSTYTWYQ
VGTDLGAGAS GMIFDADILG YFMNGGENKE RGNLGYAPFA ANPAAKAPTP NVWIWSLAMS
SFSKQKDAAW LFMQWAASTE HGLFGARKMD FVNPVRTSVW KDSEFRDRIA KSYPGYLEQH
DLSAPGAKIY FTAQPLFFDL TTEWAASLQK MVAKEVSVDE GLDKLAESIN RQLKQAGLG
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