| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2882 |
|---|
| Symbol | |
|---|
| ID | 5152877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2989104 |
|---|
| End bp | 2990066 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557761 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001238915 |
|---|
| Protein GI | 148254330 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.130369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGATT TCCGTTCCAT CGAGACATTT CTCTGGGTGG TGAAGCTGGG CAGCTTCCGC
GGCGCGGCGC AGCGCCTCAA TACCACCCAG CCCGCGATCT CCCAGCGCAT CGCCCAGCTC
GAGCGCGAGC TCGGCGTCAA GCTGCTCAAC CGCGATCACC GCGTGGCCTC GCCCACCGCG
AGCGGACGGC AGATGCTGGT CTATGCCGAG AAGCTGATCG GCCTGCGTGC GGAGATGCTG
GCCGAAGTCG GCGACCGCTC GGCGATGCGC GGCGTTCTCC GACTCGGCGT GGCCGAGACC
ATCGTGCATG ACTGGCTGCC GCGGCTGATC AAGAGCGTCA ACGAGAGCTA TCCCAATCTC
TCGCTGGAGA TCGAGGTCGA CGTCACGCCC AATCTGCACG CGCGCCTGCT GGCGCAGGAG
ATCGAGCTCG CCTTCGCATT GGGGGCGCCC TCGGAGTCGG GCATCCGCAG CCGGGTGCTG
TGCGATTACC CGATCAGCTT CCTGGCCAGC CCTGCCTTGG GCTTCGGCAA GGGCCTCGTC
ACGGCCGAGC AGATGGCACG GTTTCCGATC ATCACCTTCC CGCGCAACAC CCAGCCCTAT
GACAATGTGC GCTCTCTGTT CAACCGGCCG CATTTGCCGC CGATGCGGCT GCACGCCAGC
GCCTCGCTGG CGACCGTCAT CCACATGGCG ATCGAGGGCC TCGGTGTCGC CGTGATTCCC
GCGGCGATCG TCGCCAACGA GATCGAGAGC GGACGCTTGC AGGAGCTAGA AACGGATCTG
CGGATTCCGC CACTGACCTT CACCGCAAGC TGGCTGTCAT CGCCCGAGAT GGTCGCGATC
GAGCGCGTTG CCGAGCTCGC AGCCAGGACG GCGCAGACGG CCAGCCATCC GGCCGCATCG
GTTGACGGGA TCGTCGCGGC GCGCGATGGA CAGGATGCCG GAGTACAGGA AATTCAAGCA
TGA
|
|---|
| Protein sequence | MLDFRSIETF LWVVKLGSFR GAAQRLNTTQ PAISQRIAQL ERELGVKLLN RDHRVASPTA
SGRQMLVYAE KLIGLRAEML AEVGDRSAMR GVLRLGVAET IVHDWLPRLI KSVNESYPNL
SLEIEVDVTP NLHARLLAQE IELAFALGAP SESGIRSRVL CDYPISFLAS PALGFGKGLV
TAEQMARFPI ITFPRNTQPY DNVRSLFNRP HLPPMRLHAS ASLATVIHMA IEGLGVAVIP
AAIVANEIES GRLQELETDL RIPPLTFTAS WLSSPEMVAI ERVAELAART AQTASHPAAS
VDGIVAARDG QDAGVQEIQA
|
|---|
| |