| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2878 |
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| Symbol | |
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| ID | 5152925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2984453 |
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| End bp | 2985229 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640557757 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001238911 |
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| Protein GI | 148254326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.240803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0339025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC ATCTGCGCGG CAAGCGCGTT CTCATCACCG GCGCCTCCAA GGGCATCGGC
GCCGCAGCAG CGGAAGTGTT CGCCGAGGAA GGCTGCCACG TCCGCCTCGC GGCGCGCAGC
GCCGACCGGC TCTCCGCGCT GGTCGAGCAG CTCAGGTCGA AGCATCAGAT CGATGCGGCG
GCGCATGTGG TGGATCTGCG CAAATCCGAG GACGTCACCC GGCTGGCCCA AGAGGCCGCC
GACATCGACA TCCTCGTCAA CAATGCGGGC GACATTCCGG GCGGGCCGAT CGACAAGATC
GACGAGACGA CCTGGCGGCA CGCCTGGGAC TTGAAGGTGT TCGGCTTCAT CAACCTCACC
AGGCTGGTCT ACGCACAGAT GAAGGCACGC GGATCGGGCG TGATCATCAA CGACATCGGC
GCGGCCGGCG AGAAGTTCGA CGCCAACTAC ATCTGCGGCA GCGCCGGCAA TGCGGCGCTG
ATGGCGTTCA CCAGGGCGCT CGGCTCCAAG AGCCTCGCCG ACAACATCCG CGTCGTCGGC
ATCAATCCGG GGCCGGTGGG CACCGACCGC CACGTCACCC TGCTGAAGAC CCGCGCGCGA
CAGCAATTCG GTGACGAGAG CCGCTACACG GAATTCCAGA AGGGCCTGCC GCTCGGCCGC
CCCGCGCATG TCAGGGAGAT CGCCGACCTG ATGGCCTTCC TGGCATCCGA CCGTGCCGGC
TACACGTCGG GCGTGATCTA TACCGTCGAC GGCGGCATCA GCGCAGGGTG GGGTTGA
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| Protein sequence | MDLHLRGKRV LITGASKGIG AAAAEVFAEE GCHVRLAARS ADRLSALVEQ LRSKHQIDAA
AHVVDLRKSE DVTRLAQEAA DIDILVNNAG DIPGGPIDKI DETTWRHAWD LKVFGFINLT
RLVYAQMKAR GSGVIINDIG AAGEKFDANY ICGSAGNAAL MAFTRALGSK SLADNIRVVG
INPGPVGTDR HVTLLKTRAR QQFGDESRYT EFQKGLPLGR PAHVREIADL MAFLASDRAG
YTSGVIYTVD GGISAGWG
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