Gene BBta_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2709 
Symbol 
ID5149939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2801733 
End bp2802650 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID640557601 
ProductAraC family transcriptional regulator 
Protein accessionYP_001238755 
Protein GI148254170 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.796012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCT TTCGCACCAA GCCGTCGATC CCTGCCTTTG CGCTGTATGG CGAGGCCTCC 
GCCGCGCAGC CGGACATGCT GCATATCGAG CCGATCCAGG TGCGCAGCCG GCTCTATCGC
TGGGAGATCG AGGCCCACAC CCATCAGGGT CTGCACCAGA TCCTCTGGGT CGGCTCCGGC
CCCGCCGAGA TCGCCTTGGA CGAAAGCCGC GAGCGTTGCA CCGGCCCGGT CGCGGTGATC
ATCCCGCCCG GCGTGGTCCA CGCCTTCCGC TTCTCGCGCG AGACCGACGG CTTCGTCCTC
ACGTTCAATC CGCGCGCCGT GGTCGAGGGC GATGTGCCGG CGACGGGCGA GGCGCTGCGC
GATCTGTTTG CAACGCCGCA AATCCTGCAT CTCGAGCCCA AGGCCGTCGC GACGGGCCGC
ATCGGCGCGC TGCTCGTCGA CCTCGCCGAT GAGTTCGCTG CCGCGGATTC CGCAGCCTCG
CCGGTGCCGC ATTGGCTTGG GCGCTCGATC GTTTGGCGAC TGGCGCAGCA GAGCGCGCGG
CAGTCGCAGG GCGCGCGGCG CGGCAGCGGG CATGCGGCGC TGTTCACCCG GTTCATCGTG
CTGGTCGAGG CGCACCACCG CGACCACTGG TCGGTGGCGC GCTATGCCGA CGAGCTCGGC
ATGACGCCGG AGCGGCTGAA CCGTCTGACG CGGGCCGAAA CCGGCCAGTC CGCGCTGGAC
ATCGTGCATG CGCGGCTCGC CCGCGAGGCC TGCCGGCGGC TCACTTATAT TGCAGCGCCG
GTGTCCAAGC TGGCGTTCGA GCTCGGCTTC AAGGACCCGG CCTATTTCTG CCGCTTCTTC
AAGCGCCATA CGGGGGCCAG TCCGCGCGAC TACCGCCGCG CGATGGGCGT TTCGACCGAG
GCCGGAGCAG CCGGCTGA
 
Protein sequence
MPRFRTKPSI PAFALYGEAS AAQPDMLHIE PIQVRSRLYR WEIEAHTHQG LHQILWVGSG 
PAEIALDESR ERCTGPVAVI IPPGVVHAFR FSRETDGFVL TFNPRAVVEG DVPATGEALR
DLFATPQILH LEPKAVATGR IGALLVDLAD EFAAADSAAS PVPHWLGRSI VWRLAQQSAR
QSQGARRGSG HAALFTRFIV LVEAHHRDHW SVARYADELG MTPERLNRLT RAETGQSALD
IVHARLAREA CRRLTYIAAP VSKLAFELGF KDPAYFCRFF KRHTGASPRD YRRAMGVSTE
AGAAG