| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2506 |
|---|
| Symbol | |
|---|
| ID | 5153465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2590014 |
|---|
| End bp | 2591027 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557418 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238572 |
|---|
| Protein GI | 148253987 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC AAGGCAGCCA TTCGCGATCC GATCCCGGGT TGCCGCAGTT GGCGGCGACG
TCCCGCGGGC AGGTCAGTGG CGCAGTCACC GCACCTCCGC TGGAGGGCGC CGGCAACGAC
AGGGCCGGCG CCCTGATCGT CGCGATCTCC GCCGTCGCCT TCAGCACGGC AGGATTGTTC
ACGCGACTGG TCGAGGCGGA CGTCTGGACC ATGCTGTTCT GGCGCGGACT GTTCGGCGGC
ATCATGATCG GCGCCTATGT CATCTGGACG GAACGCACGG CACACCGGAA GGCGTTCACT
GCCATCGGCT GGGCAGGAGT GCTGACGGCG ACCTGCTCGA CCGCCGGCAC GATCTGCTTC
GTTGCGGCGC TACGCATGAC CACGGTCGCC GACGTCACCA TCGTCTATGC GACAGCTCCC
TTCATTGCAG CAGGGATCGC CTGGGTCTGG CCCCGTGAAC GTCCGCGCTG CGTCACGCTC
GTCGCCAGCG GCCTCGCCCT GCTCGGCGTC GTCATCCTGT CTGCCGCCGC GCTCCCGGCG
GCACGGATGC TCGGCAATCT GCTCGCACTC ACCATGACGA TCCTGCTGGC CTTGATGATG
GTCATCAATC GCAGATTCCG GCACGTTTCG ATGGTGCCGG CAGCCTGCCT CTCTGCCTTC
GCCTGCGCCG TGCTCGTCGC CCCGCTGGCG GACCCCATGA GCGTGACCGG TGCGGACCTC
GTTCTCTTGA TGTTGTTCGG GACGACGCAG TTCGGAATGG GCCTCCTGCT GCTCACGATC
GGCAGTCGCC GAATTCCGGC AGCACGCGCG TCGCTGCTCG GCAATCTGGA GCTGCCGCTT
GCGCCACTCT GGATCTGGAT TGCGTTCGGC GAACTGCCAT CACGATCGAC GCTCGTCGGC
GGAGCCGTCG TGTGTGCAGC GCTACTGCTC GACCTTGCGG CCGATCAGGC CCCAGGGCGC
TGGCTCGGCC GCCCCCCATT GCACCAGAAG GCTCCAGACA TGGGGCGTGG TTGA
|
|---|
| Protein sequence | MPDQGSHSRS DPGLPQLAAT SRGQVSGAVT APPLEGAGND RAGALIVAIS AVAFSTAGLF
TRLVEADVWT MLFWRGLFGG IMIGAYVIWT ERTAHRKAFT AIGWAGVLTA TCSTAGTICF
VAALRMTTVA DVTIVYATAP FIAAGIAWVW PRERPRCVTL VASGLALLGV VILSAAALPA
ARMLGNLLAL TMTILLALMM VINRRFRHVS MVPAACLSAF ACAVLVAPLA DPMSVTGADL
VLLMLFGTTQ FGMGLLLLTI GSRRIPAARA SLLGNLELPL APLWIWIAFG ELPSRSTLVG
GAVVCAALLL DLAADQAPGR WLGRPPLHQK APDMGRG
|
|---|
| |