Gene BBta_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2481 
Symbol 
ID5152865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2567865 
End bp2568794 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID640557397 
Productputative deacetylase 
Protein accessionYP_001238552 
Protein GI148253967 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGC TGTATCTTTC TCACGAAGCC TGCCTCGATC ATGCGACGCC CTCCGGACAC 
CCCGAGCGTG CCGATCGCCT GCGCGCCGTG GAAGAAGCCC TGACCGAGGA ACGCTTCGCC
CTGCTGGATC GCGACGAGGC CCCGGAAGCG GACATCGCGC TCGCTTTGCT CTGCCACAAT
GAGCATTACG TCACCGAATT GCGCCAGATG GCGCCGACCT CGGGGATCAT CTATCTCGAC
GGCGACACCT CGATGTCGCC AGGCACCTGG GAAGCGGTGA TGCGCGGCGT CGGCGGGGCC
GTGGCTGCGA CCGAATCAGT GATGTCCGGC CGCCACCGCA ATGCCTTCGT GGCGGTGCGC
CCGCCCGGCC ACCATGCCGA GATCGCCAAG CCGATGGGCT TCTGCTTCTT CGACAATGTC
GCGATCGCCG CCCGCTACGC CCAGCGCACC TTCGGGATCG AGCGCGCCGC CATCATCGAT
TTCGACGTCC ATCACGGCAA CGGCACCCAG GACATCTTCT GGGCCGACAA GAGCGTGATG
TACTGCTCGA CCCACCAGAT GCCGCTGTTC CCGGGCACCG GCGCCCGCGG CGAGCGCGGC
GAGCACGACA CCATCGTCAA CGCGCCGCTC GCCTCCGACG ATGGCAGCCT GGAGTTCCGC
TCCGCCTTCG AAAACCTGAT CCTGCCGCAG CTGACCAAGT TCAGCCCGGA GCTCGTGATC
ATCTCGGCCG GCTTCGACGC CCATTATCGC GACCCACTCG CATCTCTGAA TCTCAGGGCC
GAAGATTTCG GCTGGGTGAC GCGCAAGCTG ATGGATCTCG CCGACAAATG CGCCGGCGGC
CGCGTCGTTT CGGTCCTGGA GGGCGGCTAT GACCTTCAGG GACTGAAGGA ATCCGTCTCC
GCCCACGTTG CCGCGCTGAC CGGGGCGTAA
 
Protein sequence
MSTLYLSHEA CLDHATPSGH PERADRLRAV EEALTEERFA LLDRDEAPEA DIALALLCHN 
EHYVTELRQM APTSGIIYLD GDTSMSPGTW EAVMRGVGGA VAATESVMSG RHRNAFVAVR
PPGHHAEIAK PMGFCFFDNV AIAARYAQRT FGIERAAIID FDVHHGNGTQ DIFWADKSVM
YCSTHQMPLF PGTGARGERG EHDTIVNAPL ASDDGSLEFR SAFENLILPQ LTKFSPELVI
ISAGFDAHYR DPLASLNLRA EDFGWVTRKL MDLADKCAGG RVVSVLEGGY DLQGLKESVS
AHVAALTGA