| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2419 |
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| Symbol | |
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| ID | 5151239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2504125 |
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| End bp | 2505189 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557337 |
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| Product | putative spermidine/putrescine-binding periplasmic protein |
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| Protein accession | YP_001238492 |
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| Protein GI | 148253907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT CATCGCGTCG CTTTTCCCTG AGCCGCCGGC GCTTGCTGAC TGCGGCGGCC
TCGCTCGGCG CCGGCGTGAT CGCGGCGCCT TACGTCGCGC GCGCCGATGA GGCGGTGCTG
AACGTGACGG GCTGGGGCGG CAAATGGGGC GAGGTGATGA AGGCGGAGAT CGGCCCGGCC
TTCGAGACCG AGTTCAAGTG CAAACTCAAG ACCGATACCG CCCTGCCCTT CCTGCCGAAG
CTGCAGGCCA GTTCGCGCTC TGCGCCGGTC TATGACGTGC TGCACACCAA CTCCAACGAG
CAGTGGGCGG CCGTCGAAAT GGGCCTCGTC GAGCCCAAGG TCGACCCCAG GCTGGTGCCG
AACATCGCCG ACGTCTACCC CTACGCCGTC AGCGACAAGA TCGTCGGCGT CTGCATCTTC
ACCAGCGCCA TTGGCTTGGG CATGCGCACC GACAAGGGCT ATGGCAGCAT CACGTCGTGG
AAGGACTACT GGGACGCGAA ATTCAACGGC GCGCGCGGCG GCTATGTCAT CCCCGCGAAC
AGCCTCGGAC AGGCGTTCGT GATGATGTGC GGCACGCTCT TCGGCAAGGG CCAGACCGAT
CTCGATGCCG CCTATGCGGC GCTGGAGAAG CTGAAGCCGA TCAAGCTCGT CGACTTCACC
GGAGCGATGG AGAAGCTGAT CCTGTCCGGC GAGGCCGGCA TCGGCATTCT CCACGATTCC
GGCATCTATC GCTACGACGG CCAGAACCAG CCGGTCGACT TCGTCACGCC GAAAGAGGGC
GTGCTGTCGC TGGAACAGGT GCTGAGCATC ACCCCGGGCA GCAAGGCGAA GGAGCTCGGC
AATGCCTATA TCAACTACAT GCTGCGGCCC GATGTTCAAA AGCGCCTCGC GGAGACGGTG
TGGTATTCGC CGGCCAACAA ACAGGTGAAG CTCGACGCGA AGTATGATGC GAAGCTGCTG
ACCACGCCGG AGAAGGTCAG CAAGCTGATC CAGGTCGACT GGAAGTGGTA CAACGCGCAG
AAGGACGAGA TCGACAGCCG GGTCAACCGG ATCTTCCGCG CATGA
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| Protein sequence | MTASSRRFSL SRRRLLTAAA SLGAGVIAAP YVARADEAVL NVTGWGGKWG EVMKAEIGPA
FETEFKCKLK TDTALPFLPK LQASSRSAPV YDVLHTNSNE QWAAVEMGLV EPKVDPRLVP
NIADVYPYAV SDKIVGVCIF TSAIGLGMRT DKGYGSITSW KDYWDAKFNG ARGGYVIPAN
SLGQAFVMMC GTLFGKGQTD LDAAYAALEK LKPIKLVDFT GAMEKLILSG EAGIGILHDS
GIYRYDGQNQ PVDFVTPKEG VLSLEQVLSI TPGSKAKELG NAYINYMLRP DVQKRLAETV
WYSPANKQVK LDAKYDAKLL TTPEKVSKLI QVDWKWYNAQ KDEIDSRVNR IFRA
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