Gene BBta_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2397 
Symbol 
ID5151153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2484686 
End bp2485744 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID640557317 
Producthypothetical protein 
Protein accessionYP_001238472 
Protein GI148253887 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAC CGAGCACCGG GGGCATGCTG GCGCTGCTCG GCCTGGCGTT TCTGATCCAG 
TATTTCGAGC AGCGTTCCGA AGAGATGCGT GGCCAGAGAT CAAGCACCGC ATTGGGGGAT
GACCGAGGCC GGCTCGCCAA CGCGCCGTCC GAGATTCCGG CGCGAGGGTG GAAGGACGTC
CTGTATCGGG TCTATCAGAA CATCACCGAG CACAGGATCG TGGCGCTGGC GGCGGGGATG
ACGTTCTATA CGCTGCTGGC CATCTTTCCG GCGCTGGCGG CGCTGGTCGC GATCTATGGC
CTGTTTTCCG ATCCGGCCAG GATCACCGGG CATCTGGAGC AGCTGCAGGG GCTGCTGCCG
GGCGGCGCCA TCGATATTGC GCGCGATCAG CTCACGCGGG TCTCCGCCAA AGGCAGCCAG
GCCCTCGGTC TGACATTCGG GATCAGCCTG GCGATTTCAT TGTGGAGCGC CAATGCCGCC
ATGAAGTCGC TGTTCGACAC GCTCAACGTG GTCTATCGCG AGCCGGAGAC GCGCGGCTTC
TTCAAGCTCA ACGCGATCTC GCTGCTGTTC ACCGGCGGCG CGATCCTGTT CGCGCTGGTG
GCGATCGGCG CCATCGTCGT GGTCCCGGTG GTGCTGCATT CTATGGGCCT GTCGGATGCC
GCCGATCTCC TGCTGCGCAT CGGCCGCTGG CCCGCGATCT TCGTCTGCGT GTCGCTCGGG
CTCGCGCTGA TCTACCGCTA CGGGCCGGAT CGCGAGGAGC CGAAATGGCG CTGGATCAGC
TGGGGCAGTG CGCTGGCGGC GGCGCTGTGG CTCGGAGGAT CGGCGCTGTT CTCCTGGTAT
GCGGCGAATT TCGGCAGCTT CAACGCCACC TACGGCTCGC TCGGCGCGGC GATCGGCTTC
ATGACCTGGA TCTGGATCTC GGCCATCGTG ATCCTGATCG GCGGTGAGCT CGACGCCGAA
CTGGAGCATC AGACCCTGCG CGACACCACC ACCGGCCCGG AGAAGCCGCT CGGCGCGCGC
GGCGCCACCA TGGCCGACAC GGTCGGCCAT TCCACCTGA
 
Protein sequence
MRGPSTGGML ALLGLAFLIQ YFEQRSEEMR GQRSSTALGD DRGRLANAPS EIPARGWKDV 
LYRVYQNITE HRIVALAAGM TFYTLLAIFP ALAALVAIYG LFSDPARITG HLEQLQGLLP
GGAIDIARDQ LTRVSAKGSQ ALGLTFGISL AISLWSANAA MKSLFDTLNV VYREPETRGF
FKLNAISLLF TGGAILFALV AIGAIVVVPV VLHSMGLSDA ADLLLRIGRW PAIFVCVSLG
LALIYRYGPD REEPKWRWIS WGSALAAALW LGGSALFSWY AANFGSFNAT YGSLGAAIGF
MTWIWISAIV ILIGGELDAE LEHQTLRDTT TGPEKPLGAR GATMADTVGH ST