Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2343 |
Symbol | rnhB |
ID | 5149592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2428990 |
End bp | 2429868 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640557265 |
Product | ribonuclease HII |
Protein accession | YP_001238421 |
Protein GI | 148253836 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.391883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCCA TGATTCGAGA CCAAGCTAAA ACGCCGGGCA GGGCGAAATC GGCCGCTGCT GCAAAGGCCA GCCCGGCTGC GAAAGGCGGC GGCAATGAGG CCGCCCAAAG CGCTGCAGGC AAGGCCGCTG CCAAGCCCGC CGCAAAGCCC GCCACCAGCA AGTCCGGCAA GGGCGTCATC GCCGTGGCGC CGCCGAGCTT CCGGCGCGAG CGCGCGCTGT TGAAGCAGGG CATCTGGCCG GTGGCCGGGT GTGACGAGGC CGGCCGTGGT CCGCTGGCCG GCCCCGTGGT TGCGGCCGCG GTGATTCTTG ATCCCAACCG CATCCCGAAG GGCCTCGACG ATTCGAAGCG GCTGAGCGCC GAGCAGCGCG AGGCGCTGTT CGACAAGATC TGCAAGACAT CGGCGTTCGC GGTCGCCTTC GCCTCGCCGG CGCGAATCGA TCGCGACAAC ATCCTGCGCG CGTCGCTCTG GGCGCTGTCA CGCGCGGTGA GGGCGCTGCC CGAGGCACCC AAGCACGTGT TCGTCGATGG CCGCGACCGA ATCGACGTCG ACTGCCATTG CGAGGCGGTG ATCGGCGGGG ATGGGCTGGT GATGTCGATC GCGGCGGCCT CGATCGTCGC CAAGGTCACG CGCGACCGGC TGATGTGCGC CTTGGCGCAG GATTGCCCGG GCTACGGCTT CGAGCAGCAC AAGGGCTATG GCGTGCCCGA GCATCTCGCC GCGCTGGATC GGTTGGGGCC CTCGGTACAT CACCGCAGCC TGTTTGCGCC TGTAGTGGCG GCGCGGCGCA AGCATCAGCC CTGGGCCGAC GTGCCGGAGC CCGATCTCTT CGCGGACGTG ACGGTGGTGA CATCCAGCGA AATCGCGCTT GGCGCCTGA
|
Protein sequence | MPAMIRDQAK TPGRAKSAAA AKASPAAKGG GNEAAQSAAG KAAAKPAAKP ATSKSGKGVI AVAPPSFRRE RALLKQGIWP VAGCDEAGRG PLAGPVVAAA VILDPNRIPK GLDDSKRLSA EQREALFDKI CKTSAFAVAF ASPARIDRDN ILRASLWALS RAVRALPEAP KHVFVDGRDR IDVDCHCEAV IGGDGLVMSI AAASIVAKVT RDRLMCALAQ DCPGYGFEQH KGYGVPEHLA ALDRLGPSVH HRSLFAPVVA ARRKHQPWAD VPEPDLFADV TVVTSSEIAL GA
|
| |